STRINGSTRING
AGI23533.1 AGI23533.1 AGI23534.1 AGI23534.1 AGI26314.1 AGI26314.1 AGI21988.1 AGI21988.1 AGI23609.1 AGI23609.1 AGI26156.1 AGI26156.1 AGI26025.1 AGI26025.1 AGI22524.1 AGI22524.1 AGI25757.1 AGI25757.1 AGI23331.1 AGI23331.1 AGI25755.1 AGI25755.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI23533.1COG3184 Uncharacterized protein conserved in bacteria. (169 aa)    
Predicted Functional Partners:
AGI23534.1
Morphogene protein BolA; COG0271 Stress-induced morphogen (activity unknown); Belongs to the BolA/IbaG family.
  
    0.809
AGI26314.1
HAMP domain-containing protein.
  
     0.763
AGI21988.1
Hypothetical protein.
  
     0.728
AGI23609.1
DNA binding-protein.
  
   
 0.726
AGI26156.1
Hypothetical protein.
  
     0.708
AGI26025.1
Hypothetical protein.
  
     0.694
AGI22524.1
Hypothetical protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
  
     0.692
AGI25757.1
Alginate-c5-mannuronan-epimerase AlgG.
  
     0.660
AGI23331.1
Hypothetical protein.
  
     0.647
AGI25755.1
Alginate biosynthetic protein AlgK; COG0790 FOG: TPR repeat, SEL1 subfamily.
  
     0.646
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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