Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGI22174.1 | AGI23300.1 | H681_01460 | H681_07120 | COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases. | COG0278 Glutaredoxin-related protein; Belongs to the glutaredoxin family. Monothiol subfamily. | 0.629 |
AGI22174.1 | AGI23534.1 | H681_01460 | H681_08290 | COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases. | Morphogene protein BolA; COG0271 Stress-induced morphogen (activity unknown); Belongs to the BolA/IbaG family. | 0.469 |
AGI23300.1 | AGI22174.1 | H681_07120 | H681_01460 | COG0278 Glutaredoxin-related protein; Belongs to the glutaredoxin family. Monothiol subfamily. | COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases. | 0.629 |
AGI23300.1 | AGI23534.1 | H681_07120 | H681_08290 | COG0278 Glutaredoxin-related protein; Belongs to the glutaredoxin family. Monothiol subfamily. | Morphogene protein BolA; COG0271 Stress-induced morphogen (activity unknown); Belongs to the BolA/IbaG family. | 0.964 |
AGI23300.1 | AGI26469.1 | H681_07120 | H681_23010 | COG0278 Glutaredoxin-related protein; Belongs to the glutaredoxin family. Monothiol subfamily. | Dithiol-glutaredoxin protein; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins. | 0.751 |
AGI23300.1 | nfuA | H681_07120 | H681_10990 | COG0278 Glutaredoxin-related protein; Belongs to the glutaredoxin family. Monothiol subfamily. | Hypothetical protein; Involved in iron-sulfur cluster biogenesis. Binds a 4Fe-4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe/S proteins. Could also act as a scaffold/chaperone for damaged Fe/S proteins. | 0.783 |
AGI23532.1 | AGI23533.1 | H681_08280 | H681_08285 | Hypothetical protein. | COG3184 Uncharacterized protein conserved in bacteria. | 0.571 |
AGI23532.1 | AGI23534.1 | H681_08280 | H681_08290 | Hypothetical protein. | Morphogene protein BolA; COG0271 Stress-induced morphogen (activity unknown); Belongs to the BolA/IbaG family. | 0.507 |
AGI23532.1 | fumC | H681_08280 | H681_08275 | Hypothetical protein. | Fumarate hydratase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.624 |
AGI23533.1 | AGI23532.1 | H681_08285 | H681_08280 | COG3184 Uncharacterized protein conserved in bacteria. | Hypothetical protein. | 0.571 |
AGI23533.1 | AGI23534.1 | H681_08285 | H681_08290 | COG3184 Uncharacterized protein conserved in bacteria. | Morphogene protein BolA; COG0271 Stress-induced morphogen (activity unknown); Belongs to the BolA/IbaG family. | 0.809 |
AGI23533.1 | AGI23535.1 | H681_08285 | H681_08295 | COG3184 Uncharacterized protein conserved in bacteria. | COG1054 Predicted sulfurtransferase; Belongs to the UPF0176 family. | 0.414 |
AGI23533.1 | AGI23536.1 | H681_08285 | H681_08300 | COG3184 Uncharacterized protein conserved in bacteria. | COG3531 Predicted protein-disulfide isomerase. | 0.484 |
AGI23533.1 | AGI23537.1 | H681_08285 | H681_08305 | COG3184 Uncharacterized protein conserved in bacteria. | COG1132 ABC-type multidrug transport system, ATPase and permease components. | 0.522 |
AGI23533.1 | fumC | H681_08285 | H681_08275 | COG3184 Uncharacterized protein conserved in bacteria. | Fumarate hydratase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.449 |
AGI23534.1 | AGI22174.1 | H681_08290 | H681_01460 | Morphogene protein BolA; COG0271 Stress-induced morphogen (activity unknown); Belongs to the BolA/IbaG family. | COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases. | 0.469 |
AGI23534.1 | AGI23300.1 | H681_08290 | H681_07120 | Morphogene protein BolA; COG0271 Stress-induced morphogen (activity unknown); Belongs to the BolA/IbaG family. | COG0278 Glutaredoxin-related protein; Belongs to the glutaredoxin family. Monothiol subfamily. | 0.964 |
AGI23534.1 | AGI23532.1 | H681_08290 | H681_08280 | Morphogene protein BolA; COG0271 Stress-induced morphogen (activity unknown); Belongs to the BolA/IbaG family. | Hypothetical protein. | 0.507 |
AGI23534.1 | AGI23533.1 | H681_08290 | H681_08285 | Morphogene protein BolA; COG0271 Stress-induced morphogen (activity unknown); Belongs to the BolA/IbaG family. | COG3184 Uncharacterized protein conserved in bacteria. | 0.809 |
AGI23534.1 | AGI23535.1 | H681_08290 | H681_08295 | Morphogene protein BolA; COG0271 Stress-induced morphogen (activity unknown); Belongs to the BolA/IbaG family. | COG1054 Predicted sulfurtransferase; Belongs to the UPF0176 family. | 0.469 |
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