STRINGSTRING
AGI23581.1 AGI23581.1 AGI22481.1 AGI22481.1 AGI23580.1 AGI23580.1 AGI23673.1 AGI23673.1 AGI23579.1 AGI23579.1 AGI24420.1 AGI24420.1 AGI23582.1 AGI23582.1 AGI24999.1 AGI24999.1 AGI26105.1 AGI26105.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI23581.1MFS family transporter; COG0477 Permeases of the major facilitator superfamily. (454 aa)    
Predicted Functional Partners:
AGI22481.1
COG0477 Permeases of the major facilitator superfamily.
  
  
 0.565
AGI23580.1
Hypothetical protein; COG0262 Dihydrofolate reductase.
   
 
 0.564
AGI23673.1
COG0477 Permeases of the major facilitator superfamily.
  
  
 0.545
AGI23579.1
Hypothetical protein; COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes.
       0.535
AGI24420.1
COG0477 Permeases of the major facilitator superfamily.
  
   
 0.520
AGI23582.1
COG0513 Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family.
       0.517
AGI24999.1
Hypothetical protein.
  
     0.444
AGI26105.1
L-lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.
  
   
 0.402
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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