STRINGSTRING
AGI23595.1 AGI23595.1 AGI23593.1 AGI23593.1 AGI23594.1 AGI23594.1 AGI25384.1 AGI25384.1 AGI23591.1 AGI23591.1 AGI25309.1 AGI25309.1 AGI26720.1 AGI26720.1 AGI23592.1 AGI23592.1 AGI23201.1 AGI23201.1 AGI23598.1 AGI23598.1 AGI22737.1 AGI22737.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
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Textmining
[Homology]
Score
AGI23595.1COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain. (327 aa)    
Predicted Functional Partners:
AGI23593.1
Succinylglutamate desuccinylase/aspartoacylase; COG3608 Predicted deacylase.
 
    0.770
AGI23594.1
Arginine/ornithine transport protein AotP; COG4598 ABC-type histidine transport system, ATPase component.
  
  
 0.757
AGI25384.1
Putative transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins.
  
   0.727
AGI23591.1
Polar amino acid ABC transporter inner membrane; COG4215 ABC-type arginine transport system, permease component.
  
  
 0.723
AGI25309.1
Transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins.
  
   0.715
AGI26720.1
Putative transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins.
  
   0.695
AGI23592.1
Arginine/ornithine transport protein AotM; COG4160 ABC-type arginine/histidine transport system, permease component.
  
    0.615
AGI23201.1
Putative transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins.
 
 
 0.610
AGI23598.1
COG3138 Arginine/ornithine N-succinyltransferase beta subunit.
 
  
 0.596
AGI22737.1
Transcriptional regulator MmsR; COG2207 AraC-type DNA-binding domain-containing proteins.
 
 
 0.584
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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