STRINGSTRING
AGI23657.1 AGI23657.1 AGI26030.1 AGI26030.1 AGI26032.1 AGI26032.1 AGI23858.1 AGI23858.1 AGI26314.1 AGI26314.1 AGI26307.1 AGI26307.1 AGI26031.1 AGI26031.1 AGI26359.1 AGI26359.1 AGI24362.1 AGI24362.1 AGI23037.1 AGI23037.1 AGI26619.1 AGI26619.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI23657.1Hypothetical protein. (238 aa)    
Predicted Functional Partners:
AGI26030.1
Hypothetical protein.
  
     0.664
AGI26032.1
Hypothetical protein; COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases).
  
     0.658
AGI23858.1
Putative ABC transporter substrate-binding protein; COG2984 ABC-type uncharacterized transport system, periplasmic component.
  
     0.648
AGI26314.1
HAMP domain-containing protein.
  
     0.619
AGI26307.1
HDOD domain-contain protein.
  
     0.611
AGI26031.1
Hypothetical protein.
  
     0.585
AGI26359.1
COG0515 Serine/threonine protein kinase.
  
     0.540
AGI24362.1
Cointegrate resolution protein T.
  
     0.513
AGI23037.1
Hypothetical protein; COG0500 SAM-dependent methyltransferases.
  
     0.490
AGI26619.1
COG1309 Transcriptional regulator.
  
     0.488
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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