STRINGSTRING
AGI23740.1 AGI23740.1 AGI23741.1 AGI23741.1 AGI23743.1 AGI23743.1 AGI24981.1 AGI24981.1 AGI24177.1 AGI24177.1 AGI23512.1 AGI23512.1 AGI23194.1 AGI23194.1 AGI23742.1 AGI23742.1 AGI23739.1 AGI23739.1 AGI24980.1 AGI24980.1 AGI24982.1 AGI24982.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurrence
Coexpression
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Textmining
[Homology]
Score
AGI23740.1Hypothetical protein; COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain. (650 aa)    
Predicted Functional Partners:
AGI23741.1
HlyD family secretion protein; COG0845 Membrane-fusion protein.
 
 0.973
AGI23743.1
HlyJ hemolysin-like protein; COG2931 RTX toxins and related Ca2+-binding proteins.
 
  
 0.847
AGI24981.1
COG0845 Membrane-fusion protein.
 
 0.781
AGI24177.1
COG0845 Membrane-fusion protein.
 
 0.739
AGI23512.1
COG0845 Membrane-fusion protein.
 
 0.736
AGI23194.1
Type I secretion membrane fusion protein, HlyD; COG0845 Membrane-fusion protein.
 
 0.730
AGI23742.1
COG0438 Glycosyltransferase.
 
    0.713
AGI23739.1
Hypothetical protein.
       0.572
AGI24980.1
COG1538 Outer membrane protein.
 
  
 0.536
AGI24982.1
COG4618 ABC-type protease/lipase transport system, ATPase and permease components.
  
  
 
0.431
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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