Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGI23755.1 | AGI23756.1 | H681_09405 | H681_09410 | COG2977 Phosphopantetheinyl transferase component of siderophore synthetase; Belongs to the P-Pant transferase superfamily. | COG0412 Dienelactone hydrolase and related enzymes. | 0.439 |
AGI23756.1 | AGI23755.1 | H681_09410 | H681_09405 | COG0412 Dienelactone hydrolase and related enzymes. | COG2977 Phosphopantetheinyl transferase component of siderophore synthetase; Belongs to the P-Pant transferase superfamily. | 0.439 |
AGI23756.1 | AGI23757.1 | H681_09410 | H681_09415 | COG0412 Dienelactone hydrolase and related enzymes. | Hypothetical protein. | 0.515 |
AGI23756.1 | AGI23758.1 | H681_09410 | H681_09420 | COG0412 Dienelactone hydrolase and related enzymes. | Transglycosylase; COG2951 Membrane-bound lytic murein transglycosylase B. | 0.507 |
AGI23756.1 | AGI24094.1 | H681_09410 | H681_11120 | COG0412 Dienelactone hydrolase and related enzymes. | COG1454 Alcohol dehydrogenase, class IV. | 0.582 |
AGI23756.1 | AGI26046.1 | H681_09410 | H681_20895 | COG0412 Dienelactone hydrolase and related enzymes. | COG2187 Uncharacterized protein conserved in bacteria. | 0.541 |
AGI23756.1 | gcvP | H681_09410 | H681_01490 | COG0412 Dienelactone hydrolase and related enzymes. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.451 |
AGI23757.1 | AGI23756.1 | H681_09415 | H681_09410 | Hypothetical protein. | COG0412 Dienelactone hydrolase and related enzymes. | 0.515 |
AGI23757.1 | AGI23758.1 | H681_09415 | H681_09420 | Hypothetical protein. | Transglycosylase; COG2951 Membrane-bound lytic murein transglycosylase B. | 0.752 |
AGI23758.1 | AGI23756.1 | H681_09420 | H681_09410 | Transglycosylase; COG2951 Membrane-bound lytic murein transglycosylase B. | COG0412 Dienelactone hydrolase and related enzymes. | 0.507 |
AGI23758.1 | AGI23757.1 | H681_09420 | H681_09415 | Transglycosylase; COG2951 Membrane-bound lytic murein transglycosylase B. | Hypothetical protein. | 0.752 |
AGI24094.1 | AGI23756.1 | H681_11120 | H681_09410 | COG1454 Alcohol dehydrogenase, class IV. | COG0412 Dienelactone hydrolase and related enzymes. | 0.582 |
AGI26046.1 | AGI23756.1 | H681_20895 | H681_09410 | COG2187 Uncharacterized protein conserved in bacteria. | COG0412 Dienelactone hydrolase and related enzymes. | 0.541 |
gcvP | AGI23756.1 | H681_01490 | H681_09410 | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | COG0412 Dienelactone hydrolase and related enzymes. | 0.451 |