STRINGSTRING
AGI23900.1 AGI23900.1 AGI26439.1 AGI26439.1 AGI24783.1 AGI24783.1 AGI24810.1 AGI24810.1 AGI24883.1 AGI24883.1 AGI22781.1 AGI22781.1 AGI25035.1 AGI25035.1 AGI24733.1 AGI24733.1 AGI22336.1 AGI22336.1 AGI25750.1 AGI25750.1 AGI24769.1 AGI24769.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI23900.1COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (288 aa)    
Predicted Functional Partners:
AGI26439.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.721
AGI24783.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.718
AGI24810.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.706
AGI24883.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.700
AGI22781.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.683
AGI25035.1
Regulatory protein LysR; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.666
AGI24733.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.664
AGI22336.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.652
AGI25750.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.619
AGI24769.1
Transcriptional Regulator, LysR family; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.613
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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