Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGI21953.1 | AGI25241.1 | H681_00355 | H681_16865 | COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.426 |
AGI21953.1 | cysB | H681_00355 | H681_10535 | COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.419 |
AGI22781.1 | cysB | H681_04505 | H681_10535 | COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.464 |
AGI23218.1 | cysB | H681_06710 | H681_10535 | Sigma E regulatory protein MucB/RseB; COG3026 Negative regulator of sigma E activity. | COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.449 |
AGI23977.1 | AGI23978.1 | H681_10525 | H681_10530 | 5'-nucleotidase. | COG0589 Universal stress protein UspA and related nucleotide-binding proteins. | 0.590 |
AGI23977.1 | cysB | H681_10525 | H681_10535 | 5'-nucleotidase. | COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.419 |
AGI23978.1 | AGI23977.1 | H681_10530 | H681_10525 | COG0589 Universal stress protein UspA and related nucleotide-binding proteins. | 5'-nucleotidase. | 0.590 |
AGI23978.1 | cysB | H681_10530 | H681_10535 | COG0589 Universal stress protein UspA and related nucleotide-binding proteins. | COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.527 |
AGI24535.1 | cysB | H681_13325 | H681_10535 | COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.416 |
AGI24706.1 | cysB | H681_14180 | H681_10535 | COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.504 |
AGI24830.1 | cysB | H681_14800 | H681_10535 | COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.402 |
AGI24883.1 | cysB | H681_15075 | H681_10535 | COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.503 |
AGI25241.1 | AGI21953.1 | H681_16865 | H681_00355 | COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.426 |
AGI25241.1 | cysB | H681_16865 | H681_10535 | COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.496 |
cysB | AGI21953.1 | H681_10535 | H681_00355 | COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.419 |
cysB | AGI22781.1 | H681_10535 | H681_04505 | COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.464 |
cysB | AGI23218.1 | H681_10535 | H681_06710 | COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | Sigma E regulatory protein MucB/RseB; COG3026 Negative regulator of sigma E activity. | 0.449 |
cysB | AGI23977.1 | H681_10535 | H681_10525 | COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 5'-nucleotidase. | 0.419 |
cysB | AGI23978.1 | H681_10535 | H681_10530 | COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | COG0589 Universal stress protein UspA and related nucleotide-binding proteins. | 0.527 |
cysB | AGI24535.1 | H681_10535 | H681_13325 | COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.416 |
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