Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGI23597.1 | AGI23598.1 | H681_08615 | H681_08620 | COG3138 Arginine/ornithine N-succinyltransferase beta subunit. | COG3138 Arginine/ornithine N-succinyltransferase beta subunit. | 0.992 |
AGI23597.1 | AGI24044.1 | H681_08615 | H681_10860 | COG3138 Arginine/ornithine N-succinyltransferase beta subunit. | Putative Orn/Arg/Lys decarboxylase; COG1982 Arginine/lysine/ornithine decarboxylases. | 0.920 |
AGI23597.1 | AGI26853.1 | H681_08615 | H681_24930 | COG3138 Arginine/ornithine N-succinyltransferase beta subunit. | COG0436 Aspartate/tyrosine/aromatic aminotransferase. | 0.911 |
AGI23597.1 | arcA | H681_08615 | H681_23320 | COG3138 Arginine/ornithine N-succinyltransferase beta subunit. | COG2235 Arginine deiminase. | 0.816 |
AGI23597.1 | argH | H681_08615 | H681_01245 | COG3138 Arginine/ornithine N-succinyltransferase beta subunit. | COG0165 Argininosuccinate lyase. | 0.811 |
AGI23597.1 | speA | H681_08615 | H681_21640 | COG3138 Arginine/ornithine N-succinyltransferase beta subunit. | Arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine. | 0.900 |
AGI23598.1 | AGI23597.1 | H681_08620 | H681_08615 | COG3138 Arginine/ornithine N-succinyltransferase beta subunit. | COG3138 Arginine/ornithine N-succinyltransferase beta subunit. | 0.992 |
AGI23598.1 | AGI24044.1 | H681_08620 | H681_10860 | COG3138 Arginine/ornithine N-succinyltransferase beta subunit. | Putative Orn/Arg/Lys decarboxylase; COG1982 Arginine/lysine/ornithine decarboxylases. | 0.925 |
AGI23598.1 | AGI26853.1 | H681_08620 | H681_24930 | COG3138 Arginine/ornithine N-succinyltransferase beta subunit. | COG0436 Aspartate/tyrosine/aromatic aminotransferase. | 0.900 |
AGI23598.1 | arcA | H681_08620 | H681_23320 | COG3138 Arginine/ornithine N-succinyltransferase beta subunit. | COG2235 Arginine deiminase. | 0.816 |
AGI23598.1 | argH | H681_08620 | H681_01245 | COG3138 Arginine/ornithine N-succinyltransferase beta subunit. | COG0165 Argininosuccinate lyase. | 0.811 |
AGI23598.1 | speA | H681_08620 | H681_21640 | COG3138 Arginine/ornithine N-succinyltransferase beta subunit. | Arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine. | 0.900 |
AGI24044.1 | AGI23597.1 | H681_10860 | H681_08615 | Putative Orn/Arg/Lys decarboxylase; COG1982 Arginine/lysine/ornithine decarboxylases. | COG3138 Arginine/ornithine N-succinyltransferase beta subunit. | 0.920 |
AGI24044.1 | AGI23598.1 | H681_10860 | H681_08620 | Putative Orn/Arg/Lys decarboxylase; COG1982 Arginine/lysine/ornithine decarboxylases. | COG3138 Arginine/ornithine N-succinyltransferase beta subunit. | 0.925 |
AGI24044.1 | AGI24702.1 | H681_10860 | H681_14160 | Putative Orn/Arg/Lys decarboxylase; COG1982 Arginine/lysine/ornithine decarboxylases. | Putative peptidyl-arginine deiminase; COG2957 Peptidylarginine deiminase and related enzymes; Belongs to the agmatine deiminase family. | 0.917 |
AGI24044.1 | AGI24705.1 | H681_10860 | H681_14175 | Putative Orn/Arg/Lys decarboxylase; COG1982 Arginine/lysine/ornithine decarboxylases. | COG2957 Peptidylarginine deiminase and related enzymes; Belongs to the agmatine deiminase family. | 0.917 |
AGI24044.1 | AGI26201.1 | H681_10860 | H681_21670 | Putative Orn/Arg/Lys decarboxylase; COG1982 Arginine/lysine/ornithine decarboxylases. | Agmatinase; COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family; Belongs to the arginase family. | 0.917 |
AGI24044.1 | AGI26853.1 | H681_10860 | H681_24930 | Putative Orn/Arg/Lys decarboxylase; COG1982 Arginine/lysine/ornithine decarboxylases. | COG0436 Aspartate/tyrosine/aromatic aminotransferase. | 0.903 |
AGI24044.1 | aguA | H681_10860 | H681_23765 | Putative Orn/Arg/Lys decarboxylase; COG1982 Arginine/lysine/ornithine decarboxylases. | Agmatine deiminase; Mediates the hydrolysis of agmatine into N- carbamoylputrescine in the arginine decarboxylase (ADC) pathway of putrescine biosynthesis, a basic polyamine. | 0.917 |
AGI24044.1 | arcA | H681_10860 | H681_23320 | Putative Orn/Arg/Lys decarboxylase; COG1982 Arginine/lysine/ornithine decarboxylases. | COG2235 Arginine deiminase. | 0.843 |
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