STRINGSTRING
AGI24087.1 AGI24087.1 AGI24086.1 AGI24086.1 AGI24089.1 AGI24089.1 AGI24088.1 AGI24088.1 AGI24085.1 AGI24085.1 AGI25021.1 AGI25021.1 AGI26337.1 AGI26337.1 AGI23270.1 AGI23270.1 AGI24318.1 AGI24318.1 AGI24783.1 AGI24783.1 AGI21953.1 AGI21953.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AGI24087.1Pca operon transcription factor PcaQ; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (309 aa)    
Predicted Functional Partners:
AGI24086.1
Transcriptional regulator PobR; COG2207 AraC-type DNA-binding domain-containing proteins.
 
    0.862
AGI24089.1
COG3485 Protocatechuate 3,4-dioxygenase beta subunit.
 
   
 0.823
AGI24088.1
COG3485 Protocatechuate 3,4-dioxygenase beta subunit.
 
   
 0.792
AGI24085.1
4-hydroxybenzoate 3-monooxygenase; COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases.
 
   
 0.739
AGI25021.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.689
AGI26337.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.689
AGI23270.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
    0.651
AGI24318.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.650
AGI24783.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.645
AGI21953.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.628
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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