STRINGSTRING
AGI24089.1 AGI24089.1 AGI24088.1 AGI24088.1 AGI24085.1 AGI24085.1 AGI24150.1 AGI24150.1 AGI24152.1 AGI24152.1 AGI24087.1 AGI24087.1 AGI24086.1 AGI24086.1 AGI24100.1 AGI24100.1 AGI24146.1 AGI24146.1 AGI24151.1 AGI24151.1 AGI22937.1 AGI22937.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI24089.1COG3485 Protocatechuate 3,4-dioxygenase beta subunit. (201 aa)    
Predicted Functional Partners:
AGI24088.1
COG3485 Protocatechuate 3,4-dioxygenase beta subunit.
 
0.999
AGI24085.1
4-hydroxybenzoate 3-monooxygenase; COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases.
 
  
 0.987
AGI24150.1
3-carboxy-cis,cis-muconate cycloisomerase; COG0015 Adenylosuccinate lyase.
 
 
 0.982
AGI24152.1
4-carboxymuconolactone decarboxylase; COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit.
 
  
 0.853
AGI24087.1
Pca operon transcription factor PcaQ; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
 
   
 0.823
AGI24086.1
Transcriptional regulator PobR; COG2207 AraC-type DNA-binding domain-containing proteins.
 
   
 0.742
AGI24100.1
COG1414 Transcriptional regulator.
 
  
 0.731
AGI24146.1
Catechol 1,2-dioxygenase; COG3485 Protocatechuate 3,4-dioxygenase beta subunit.
  
   
 0.728
AGI24151.1
3-oxoadipate enol-lactonase; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
 
   
 0.694
AGI22937.1
4-carboxymuconolactone decarboxylase; COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit.
 
  
 0.686
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.