STRINGSTRING
AGI24140.1 AGI24140.1 AGI24141.1 AGI24141.1 AGI24142.1 AGI24142.1 benD benD AGI24145.1 AGI24145.1 AGI24146.1 AGI24146.1 AGI24144.1 AGI24144.1 AGI26251.1 AGI26251.1 AGI26254.1 AGI26254.1 AGI25938.1 AGI25938.1 AGI22160.1 AGI22160.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurrence
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[Homology]
Score
AGI24140.1Benzoate dioxygenase subunit alpha; COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit. (455 aa)    
Predicted Functional Partners:
AGI24141.1
COG5517 Small subunit of phenylpropionate dioxygenase.
 
 0.999
AGI24142.1
Oxidoreductase, FAD/NAD(P)-binding subunit; COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases.
 
 
 0.991
benD
COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 0.987
AGI24145.1
COG4829 Muconolactone delta-isomerase.
 
  
 0.890
AGI24146.1
Catechol 1,2-dioxygenase; COG3485 Protocatechuate 3,4-dioxygenase beta subunit.
 
  
 0.880
AGI24144.1
Muconate cycloisomerase; COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
  
 0.867
AGI26251.1
MFS family transporter; COG0477 Permeases of the major facilitator superfamily.
 
   
 0.606
AGI26254.1
COG0477 Permeases of the major facilitator superfamily.
 
  
 0.567
AGI25938.1
Hypothetical protein; COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases.
 
  
 0.547
AGI22160.1
COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases.
 
  
 0.536
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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