STRINGSTRING
AGI24142.1 AGI24142.1 benD benD AGI24141.1 AGI24141.1 AGI24140.1 AGI24140.1 nuoC nuoC AGI24145.1 AGI24145.1 AGI25193.1 AGI25193.1 AGI26178.1 AGI26178.1 AGI26334.1 AGI26334.1 AGI24144.1 AGI24144.1 gltD gltD
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI24142.1Oxidoreductase, FAD/NAD(P)-binding subunit; COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases. (336 aa)    
Predicted Functional Partners:
benD
COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 0.999
AGI24141.1
COG5517 Small subunit of phenylpropionate dioxygenase.
 
 
 0.995
AGI24140.1
Benzoate dioxygenase subunit alpha; COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit.
 
 
 0.991
nuoC
Bifunctional NADH:ubiquinone oxidoreductase subunit C/D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the C-terminal section; belongs to the complex I 49 kDa subunit family.
  
 
 0.965
AGI24145.1
COG4829 Muconolactone delta-isomerase.
 
  
 0.946
AGI25193.1
COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family.
  
 0.945
AGI26178.1
2,4-dienoyl-CoA reductase FadH; COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family.
  
 0.945
AGI26334.1
Oxidoreductase; COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family.
  
 0.945
AGI24144.1
Muconate cycloisomerase; COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
  
 0.913
gltD
COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases.
  
 0.912
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.