Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGI26299.1 | AGI26908.1 | H681_22160 | H681_25205 | COG0860 N-acetylmuramoyl-L-alanine amidase. | COG2715 Uncharacterized membrane protein, required for spore maturation in B.subtilis. | 0.432 |
AGI26299.1 | pbpG | H681_22160 | H681_11625 | COG0860 N-acetylmuramoyl-L-alanine amidase. | COG1686 D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family. | 0.439 |
AGI26299.1 | rlpA | H681_22160 | H681_03305 | COG0860 N-acetylmuramoyl-L-alanine amidase. | Rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. | 0.800 |
AGI26908.1 | AGI26299.1 | H681_25205 | H681_22160 | COG2715 Uncharacterized membrane protein, required for spore maturation in B.subtilis. | COG0860 N-acetylmuramoyl-L-alanine amidase. | 0.432 |
AGI26908.1 | pbpG | H681_25205 | H681_11625 | COG2715 Uncharacterized membrane protein, required for spore maturation in B.subtilis. | COG1686 D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family. | 0.690 |
pbpG | AGI26299.1 | H681_11625 | H681_22160 | COG1686 D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family. | COG0860 N-acetylmuramoyl-L-alanine amidase. | 0.439 |
pbpG | AGI26908.1 | H681_11625 | H681_25205 | COG1686 D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family. | COG2715 Uncharacterized membrane protein, required for spore maturation in B.subtilis. | 0.690 |
pbpG | rlpA | H681_11625 | H681_03305 | COG1686 D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family. | Rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. | 0.406 |
rlpA | AGI26299.1 | H681_03305 | H681_22160 | Rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. | COG0860 N-acetylmuramoyl-L-alanine amidase. | 0.800 |
rlpA | pbpG | H681_03305 | H681_11625 | Rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. | COG1686 D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family. | 0.406 |