STRINGSTRING
AGI24254.1 AGI24254.1 AGI22666.1 AGI22666.1 AGI22665.1 AGI22665.1 AGI24846.1 AGI24846.1 AGI22668.1 AGI22668.1 AGI24255.1 AGI24255.1 AGI22664.1 AGI22664.1 AGI22655.1 AGI22655.1 AGI22667.1 AGI22667.1 AGI24845.1 AGI24845.1 AGI22656.1 AGI22656.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI24254.1COG3157 Hemolysin-coregulated protein (uncharacterized). (172 aa)    
Predicted Functional Partners:
AGI22666.1
COG3516 Uncharacterized protein conserved in bacteria.
 
 
 0.933
AGI22665.1
COG3517 Uncharacterized protein conserved in bacteria.
 
 
 0.904
AGI24846.1
COG3157 Hemolysin-coregulated protein (uncharacterized).
     
 0.904
AGI22668.1
COG3157 Hemolysin-coregulated protein (uncharacterized).
  
  
 
0.900
AGI24255.1
Rhs element Vgr protein; COG3501 Uncharacterized protein conserved in bacteria.
 
  
 0.888
AGI22664.1
GPW/gp25 family protein; COG3518 Uncharacterized protein conserved in bacteria.
 
  
 0.840
AGI22655.1
COG3520 Uncharacterized protein conserved in bacteria.
 
  
 0.826
AGI22667.1
COG3515 Uncharacterized protein conserved in bacteria.
 
  
 0.812
AGI24845.1
COG3517 Uncharacterized protein conserved in bacteria.
 
 
 0.808
AGI22656.1
COG3519 Uncharacterized protein conserved in bacteria.
 
  
 0.803
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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