STRINGSTRING
AGI24310.1 AGI24310.1 AGI24309.1 AGI24309.1 AGI24307.1 AGI24307.1 AGI24308.1 AGI24308.1 AGI24823.1 AGI24823.1 AGI26035.1 AGI26035.1 AGI24824.1 AGI24824.1 AGI26034.1 AGI26034.1 AGI26033.1 AGI26033.1 AGI23446.1 AGI23446.1 AGI25770.1 AGI25770.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI24310.1COG3009 Uncharacterized protein conserved in bacteria. (183 aa)    
Predicted Functional Partners:
AGI24309.1
COG3008 Paraquat-inducible protein B.
 
   
 0.921
AGI24307.1
COG2995 Uncharacterized paraquat-inducible protein A.
 
  
 0.917
AGI24308.1
COG2995 Uncharacterized paraquat-inducible protein A.
 
  
 0.908
AGI24823.1
COG3008 Paraquat-inducible protein B.
 
   
 0.762
AGI26035.1
COG2995 Uncharacterized paraquat-inducible protein A.
 
  
 0.721
AGI24824.1
COG2995 Uncharacterized paraquat-inducible protein A.
 
  
 0.720
AGI26034.1
COG2995 Uncharacterized paraquat-inducible protein A.
 
  
 0.711
AGI26033.1
Mce-like protein; COG3008 Paraquat-inducible protein B.
 
   
 0.576
AGI23446.1
Hypothetical protein; COG3946 Type IV secretory pathway, VirJ component.
  
     0.492
AGI25770.1
Hypothetical protein.
 
     0.479
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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