Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AGI24319.1 | AGI24320.1 | H681_12245 | H681_12250 | Hypothetical protein. | COG1960 Acyl-CoA dehydrogenases. | 0.950 |
| AGI24319.1 | AGI24321.1 | H681_12245 | H681_12255 | Hypothetical protein. | COG2079 Uncharacterized protein involved in propionate catabolism. | 0.949 |
| AGI24319.1 | AGI24322.1 | H681_12245 | H681_12260 | Hypothetical protein. | CaiB/BaiF family protein; COG1804 Predicted acyl-CoA transferases/carnitine dehydratase; Belongs to the CoA-transferase III family. | 0.967 |
| AGI24319.1 | AGI24323.1 | H681_12245 | H681_12265 | Hypothetical protein. | HpcH/HpaI aldolase/citrate lyase; COG2301 Citrate lyase beta subunit; Belongs to the HpcH/HpaI aldolase family. | 0.983 |
| AGI24319.1 | sucC | H681_12245 | H681_13950 | Hypothetical protein. | succinyl-CoA synthetase subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.903 |
| AGI24319.1 | sucD | H681_12245 | H681_13945 | Hypothetical protein. | succinyl-CoA synthetase subunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.903 |
| AGI24320.1 | AGI24319.1 | H681_12250 | H681_12245 | COG1960 Acyl-CoA dehydrogenases. | Hypothetical protein. | 0.950 |
| AGI24320.1 | AGI24321.1 | H681_12250 | H681_12255 | COG1960 Acyl-CoA dehydrogenases. | COG2079 Uncharacterized protein involved in propionate catabolism. | 0.940 |
| AGI24320.1 | AGI24322.1 | H681_12250 | H681_12260 | COG1960 Acyl-CoA dehydrogenases. | CaiB/BaiF family protein; COG1804 Predicted acyl-CoA transferases/carnitine dehydratase; Belongs to the CoA-transferase III family. | 0.726 |
| AGI24320.1 | AGI24323.1 | H681_12250 | H681_12265 | COG1960 Acyl-CoA dehydrogenases. | HpcH/HpaI aldolase/citrate lyase; COG2301 Citrate lyase beta subunit; Belongs to the HpcH/HpaI aldolase family. | 0.665 |
| AGI24321.1 | AGI24319.1 | H681_12255 | H681_12245 | COG2079 Uncharacterized protein involved in propionate catabolism. | Hypothetical protein. | 0.949 |
| AGI24321.1 | AGI24320.1 | H681_12255 | H681_12250 | COG2079 Uncharacterized protein involved in propionate catabolism. | COG1960 Acyl-CoA dehydrogenases. | 0.940 |
| AGI24321.1 | AGI24322.1 | H681_12255 | H681_12260 | COG2079 Uncharacterized protein involved in propionate catabolism. | CaiB/BaiF family protein; COG1804 Predicted acyl-CoA transferases/carnitine dehydratase; Belongs to the CoA-transferase III family. | 0.768 |
| AGI24321.1 | AGI24323.1 | H681_12255 | H681_12265 | COG2079 Uncharacterized protein involved in propionate catabolism. | HpcH/HpaI aldolase/citrate lyase; COG2301 Citrate lyase beta subunit; Belongs to the HpcH/HpaI aldolase family. | 0.891 |
| AGI24322.1 | AGI24319.1 | H681_12260 | H681_12245 | CaiB/BaiF family protein; COG1804 Predicted acyl-CoA transferases/carnitine dehydratase; Belongs to the CoA-transferase III family. | Hypothetical protein. | 0.967 |
| AGI24322.1 | AGI24320.1 | H681_12260 | H681_12250 | CaiB/BaiF family protein; COG1804 Predicted acyl-CoA transferases/carnitine dehydratase; Belongs to the CoA-transferase III family. | COG1960 Acyl-CoA dehydrogenases. | 0.726 |
| AGI24322.1 | AGI24321.1 | H681_12260 | H681_12255 | CaiB/BaiF family protein; COG1804 Predicted acyl-CoA transferases/carnitine dehydratase; Belongs to the CoA-transferase III family. | COG2079 Uncharacterized protein involved in propionate catabolism. | 0.768 |
| AGI24322.1 | AGI24323.1 | H681_12260 | H681_12265 | CaiB/BaiF family protein; COG1804 Predicted acyl-CoA transferases/carnitine dehydratase; Belongs to the CoA-transferase III family. | HpcH/HpaI aldolase/citrate lyase; COG2301 Citrate lyase beta subunit; Belongs to the HpcH/HpaI aldolase family. | 0.985 |
| AGI24322.1 | sucC | H681_12260 | H681_13950 | CaiB/BaiF family protein; COG1804 Predicted acyl-CoA transferases/carnitine dehydratase; Belongs to the CoA-transferase III family. | succinyl-CoA synthetase subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.907 |
| AGI24322.1 | sucD | H681_12260 | H681_13945 | CaiB/BaiF family protein; COG1804 Predicted acyl-CoA transferases/carnitine dehydratase; Belongs to the CoA-transferase III family. | succinyl-CoA synthetase subunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.908 |
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