STRINGSTRING
AGI24380.1 AGI24380.1 AGI24379.1 AGI24379.1 AGI24381.1 AGI24381.1 AGI24995.1 AGI24995.1 AGI24383.1 AGI24383.1 AGI24378.1 AGI24378.1 AGI24382.1 AGI24382.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI24380.1COG1741 Pirin-related protein; Belongs to the pirin family. (297 aa)    
Predicted Functional Partners:
AGI24379.1
Porin.
       0.762
AGI24381.1
COG1765 Predicted redox protein, regulator of disulfide bond formation.
  
  
 0.645
AGI24995.1
Catalytic LigB subunit of aromatic ring-opening dioxygenase.
 
  
 0.642
AGI24383.1
COG1741 Pirin-related protein; Belongs to the pirin family.
 
    
0.452
AGI24378.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
   
   0.426
AGI24382.1
Putative hydrolase; COG1335 Amidases related to nicotinamidase.
  
  
 0.424
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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