STRINGSTRING
AGI24447.1 AGI24447.1 AGI24443.1 AGI24443.1 AGI24444.1 AGI24444.1 AGI24446.1 AGI24446.1 AGI24445.1 AGI24445.1 AGI24480.1 AGI24480.1 AGI24483.1 AGI24483.1 acpP acpP AGI25720.1 AGI25720.1 AGI23755.1 AGI23755.1 AGI24448.1 AGI24448.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI24447.1COG3251 Uncharacterized protein conserved in bacteria. (69 aa)    
Predicted Functional Partners:
AGI24443.1
PpsD; COG1020 Non-ribosomal peptide synthetase modules and related proteins.
 
 
 0.999
AGI24444.1
Peptide synthase; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
 
 
 0.993
AGI24446.1
COG3208 Predicted thioesterase involved in non-ribosomal peptide biosynthesis.
 
  
 0.971
AGI24445.1
Pyoverdine biosynthesis regulatory protein-TauD/TfdA family protein.
 
   
 0.924
AGI24480.1
L-ornithine N5-oxygenase; COG3486 Lysine/ornithine N-monooxygenase.
 
  
 0.924
AGI24483.1
Cyclic peptide transporter; COG4615 ABC-type siderophore export system, fused ATPase and permease components.
 
  
 0.846
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.846
AGI25720.1
COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog.
   
  
 0.644
AGI23755.1
COG2977 Phosphopantetheinyl transferase component of siderophore synthetase; Belongs to the P-Pant transferase superfamily.
 
  
 0.496
AGI24448.1
Extracytoplasmic-function sigma-70 factor; COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.
 
    0.484
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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