STRINGSTRING
AGI24469.1 AGI24469.1 AGI22737.1 AGI22737.1 AGI26720.1 AGI26720.1 AGI23866.1 AGI23866.1 AGI24468.1 AGI24468.1 AGI24695.1 AGI24695.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI24469.1COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain. (320 aa)    
Predicted Functional Partners:
AGI22737.1
Transcriptional regulator MmsR; COG2207 AraC-type DNA-binding domain-containing proteins.
 
 
 0.574
AGI26720.1
Putative transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins.
  
   0.561
AGI23866.1
AraC family transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins.
  
   0.501
AGI24468.1
Hypothetical protein.
       0.443
AGI24695.1
Metal dependent phosphohydrolase; COG1418 Predicted HD superfamily hydrolase.
 
     0.409
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.