node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGI21884.1 | AGI24537.1 | H681_00010 | H681_13335 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Putative helicase; COG0210 Superfamily I DNA and RNA helicases. | 0.663 |
AGI21884.1 | polA | H681_00010 | H681_01035 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.997 |
AGI21884.1 | recA | H681_00010 | H681_07745 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Recombinase A; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.845 |
AGI21884.1 | topA | H681_00010 | H681_16245 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA topoisomerase I subunit omega; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus rem [...] | 0.786 |
AGI21884.1 | uvrB | H681_00010 | H681_16810 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] | 0.487 |
AGI21994.1 | AGI23971.1 | H681_00560 | H681_10495 | Hypothetical protein; COG0438 Glycosyltransferase. | Hypothetical protein. | 0.676 |
AGI21994.1 | AGI24537.1 | H681_00560 | H681_13335 | Hypothetical protein; COG0438 Glycosyltransferase. | Putative helicase; COG0210 Superfamily I DNA and RNA helicases. | 0.770 |
AGI21994.1 | AGI25444.1 | H681_00560 | H681_17885 | Hypothetical protein; COG0438 Glycosyltransferase. | Type IV pilus assembly PilZ. | 0.748 |
AGI21994.1 | AGI26881.1 | H681_00560 | H681_25070 | Hypothetical protein; COG0438 Glycosyltransferase. | COG3210 Large exoproteins involved in heme utilization or adhesion. | 0.609 |
AGI21994.1 | AGI26884.1 | H681_00560 | H681_25085 | Hypothetical protein; COG0438 Glycosyltransferase. | Putative hemagglutinin; COG3210 Large exoproteins involved in heme utilization or adhesion. | 0.681 |
AGI21994.1 | polA | H681_00560 | H681_01035 | Hypothetical protein; COG0438 Glycosyltransferase. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.621 |
AGI23971.1 | AGI21994.1 | H681_10495 | H681_00560 | Hypothetical protein. | Hypothetical protein; COG0438 Glycosyltransferase. | 0.676 |
AGI23971.1 | AGI24537.1 | H681_10495 | H681_13335 | Hypothetical protein. | Putative helicase; COG0210 Superfamily I DNA and RNA helicases. | 0.727 |
AGI23971.1 | AGI25444.1 | H681_10495 | H681_17885 | Hypothetical protein. | Type IV pilus assembly PilZ. | 0.773 |
AGI23971.1 | AGI26881.1 | H681_10495 | H681_25070 | Hypothetical protein. | COG3210 Large exoproteins involved in heme utilization or adhesion. | 0.744 |
AGI23971.1 | AGI26884.1 | H681_10495 | H681_25085 | Hypothetical protein. | Putative hemagglutinin; COG3210 Large exoproteins involved in heme utilization or adhesion. | 0.758 |
AGI24537.1 | AGI21884.1 | H681_13335 | H681_00010 | Putative helicase; COG0210 Superfamily I DNA and RNA helicases. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.663 |
AGI24537.1 | AGI21994.1 | H681_13335 | H681_00560 | Putative helicase; COG0210 Superfamily I DNA and RNA helicases. | Hypothetical protein; COG0438 Glycosyltransferase. | 0.770 |
AGI24537.1 | AGI23971.1 | H681_13335 | H681_10495 | Putative helicase; COG0210 Superfamily I DNA and RNA helicases. | Hypothetical protein. | 0.727 |
AGI24537.1 | AGI25444.1 | H681_13335 | H681_17885 | Putative helicase; COG0210 Superfamily I DNA and RNA helicases. | Type IV pilus assembly PilZ. | 0.752 |