Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGI22852.1 | AGI24542.1 | H681_04860 | H681_13360 | COG3125 Heme/copper-type cytochrome/quinol oxidase, subunit 4. | Fusaric acid resistance domain protein; COG1289 Predicted membrane protein. | 0.507 |
AGI22852.1 | AGI25515.1 | H681_04860 | H681_18240 | COG3125 Heme/copper-type cytochrome/quinol oxidase, subunit 4. | Hypothetical protein; COG1566 Multidrug resistance efflux pump; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.529 |
AGI22852.1 | AGI25769.1 | H681_04860 | H681_19510 | COG3125 Heme/copper-type cytochrome/quinol oxidase, subunit 4. | Fusaric acid resistance protein; COG1566 Multidrug resistance efflux pump; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.408 |
AGI23152.1 | AGI24542.1 | H681_06360 | H681_13360 | COG1566 Multidrug resistance efflux pump. | Fusaric acid resistance domain protein; COG1289 Predicted membrane protein. | 0.771 |
AGI24541.1 | AGI24542.1 | H681_13355 | H681_13360 | COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | Fusaric acid resistance domain protein; COG1289 Predicted membrane protein. | 0.516 |
AGI24541.1 | AGI24543.1 | H681_13355 | H681_13365 | COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | Hypothetical protein. | 0.516 |
AGI24541.1 | AGI24544.1 | H681_13355 | H681_13370 | COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | COG1566 Multidrug resistance efflux pump. | 0.516 |
AGI24542.1 | AGI22852.1 | H681_13360 | H681_04860 | Fusaric acid resistance domain protein; COG1289 Predicted membrane protein. | COG3125 Heme/copper-type cytochrome/quinol oxidase, subunit 4. | 0.507 |
AGI24542.1 | AGI23152.1 | H681_13360 | H681_06360 | Fusaric acid resistance domain protein; COG1289 Predicted membrane protein. | COG1566 Multidrug resistance efflux pump. | 0.771 |
AGI24542.1 | AGI24541.1 | H681_13360 | H681_13355 | Fusaric acid resistance domain protein; COG1289 Predicted membrane protein. | COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.516 |
AGI24542.1 | AGI24543.1 | H681_13360 | H681_13365 | Fusaric acid resistance domain protein; COG1289 Predicted membrane protein. | Hypothetical protein. | 0.778 |
AGI24542.1 | AGI24544.1 | H681_13360 | H681_13370 | Fusaric acid resistance domain protein; COG1289 Predicted membrane protein. | COG1566 Multidrug resistance efflux pump. | 0.945 |
AGI24542.1 | AGI24545.1 | H681_13360 | H681_13375 | Fusaric acid resistance domain protein; COG1289 Predicted membrane protein. | Phosphoglycerate mutase. | 0.545 |
AGI24542.1 | AGI24546.1 | H681_13360 | H681_13380 | Fusaric acid resistance domain protein; COG1289 Predicted membrane protein. | COG0668 Small-conductance mechanosensitive channel. | 0.526 |
AGI24542.1 | AGI25515.1 | H681_13360 | H681_18240 | Fusaric acid resistance domain protein; COG1289 Predicted membrane protein. | Hypothetical protein; COG1566 Multidrug resistance efflux pump; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.791 |
AGI24542.1 | AGI25653.1 | H681_13360 | H681_18930 | Fusaric acid resistance domain protein; COG1289 Predicted membrane protein. | Scaffold protein; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters. | 0.471 |
AGI24542.1 | AGI25769.1 | H681_13360 | H681_19510 | Fusaric acid resistance domain protein; COG1289 Predicted membrane protein. | Fusaric acid resistance protein; COG1566 Multidrug resistance efflux pump; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.792 |
AGI24543.1 | AGI24541.1 | H681_13365 | H681_13355 | Hypothetical protein. | COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.516 |
AGI24543.1 | AGI24542.1 | H681_13365 | H681_13360 | Hypothetical protein. | Fusaric acid resistance domain protein; COG1289 Predicted membrane protein. | 0.778 |
AGI24543.1 | AGI24544.1 | H681_13365 | H681_13370 | Hypothetical protein. | COG1566 Multidrug resistance efflux pump. | 0.778 |
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