STRINGSTRING
AGI24544.1 AGI24544.1 AGI24542.1 AGI24542.1 AGI24543.1 AGI24543.1 AGI23150.1 AGI23150.1 AGI25472.1 AGI25472.1 AGI25517.1 AGI25517.1 AGI25325.1 AGI25325.1 AGI25229.1 AGI25229.1 AGI25771.1 AGI25771.1 AGI26507.1 AGI26507.1 AGI23586.1 AGI23586.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI24544.1COG1566 Multidrug resistance efflux pump. (319 aa)    
Predicted Functional Partners:
AGI24542.1
Fusaric acid resistance domain protein; COG1289 Predicted membrane protein.
 
  
 0.945
AGI24543.1
Hypothetical protein.
       0.778
AGI23150.1
Fusaric acid resistance domain protein; COG1289 Predicted membrane protein.
 
  
 0.773
AGI25472.1
COG1289 Predicted membrane protein.
 
  
 0.768
AGI25517.1
COG1289 Predicted membrane protein.
 
  
 0.763
AGI25325.1
Resistance-Nodulation-cell Division (RND) efflux membrane fusion protein; COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  
 0.659
AGI25229.1
MFS family transporter; COG0477 Permeases of the major facilitator superfamily.
 
 
 0.653
AGI25771.1
COG1289 Predicted membrane protein.
 
  
 0.645
AGI26507.1
Drug efflux transporter; COG0477 Permeases of the major facilitator superfamily.
 
 
 0.643
AGI23586.1
COG1289 Predicted membrane protein.
 
  
 0.633
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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