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AGI24618.1 AGI24618.1 glcB glcB acnA acnA glcF glcF AGI24017.1 AGI24017.1 AGI23775.1 AGI23775.1 AGI25774.1 AGI25774.1 AGI25892.1 AGI25892.1 AGI23554.1 AGI23554.1 AGI23555.1 AGI23555.1 AGI25223.1 AGI25223.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AGI24618.1COG2224 Isocitrate lyase. (531 aa)    
Predicted Functional Partners:
glcB
Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
 
 
 0.996
acnA
Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
   
 
 0.921
glcF
Glycolate oxidase iron-sulfur subunit; COG0247 Fe-S oxidoreductase.
     
 0.918
AGI24017.1
Bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; COG1049 Aconitase B; Belongs to the aconitase/IPM isomerase family.
    
 0.916
AGI23775.1
COG3960 Glyoxylate carboligase; Belongs to the TPP enzyme family.
     
 0.913
AGI25774.1
Putative 2-hydroxyacid dehydrogenase; COG1052 Lactate dehydrogenase and related dehydrogenases; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
     
 0.908
AGI25892.1
COG1052 Lactate dehydrogenase and related dehydrogenases; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
     
 0.908
AGI23554.1
FAD linked oxidase domain-containing protein; COG0277 FAD/FMN-containing dehydrogenases.
     
 0.905
AGI23555.1
Glycolate oxidase subunit GlcD; COG0277 FAD/FMN-containing dehydrogenases.
     
 0.905
AGI25223.1
Putative aldolase; COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase.
     
 0.905
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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