STRINGSTRING
AGI24732.1 AGI24732.1 AGI22720.1 AGI22720.1 AGI22551.1 AGI22551.1 AGI24733.1 AGI24733.1 AGI22548.1 AGI22548.1 AGI26235.1 AGI26235.1 AGI22550.1 AGI22550.1 AGI23543.1 AGI23543.1 AGI22549.1 AGI22549.1 AGI25147.1 AGI25147.1 AGI23121.1 AGI23121.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI24732.1Hypothetical protein; COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily. (316 aa)    
Predicted Functional Partners:
AGI22720.1
Hypothetical protein.
  
   0.699
AGI22551.1
COG3539 P pilus assembly protein, pilin FimA.
  
     0.556
AGI24733.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
    0.518
AGI22548.1
Fimbrial subunit protein; COG3539 P pilus assembly protein, pilin FimA.
  
     0.457
AGI26235.1
COG2982 Uncharacterized protein involved in outer membrane biogenesis.
  
     0.415
AGI22550.1
Outer membrane usher protein; COG3188 P pilus assembly protein, porin PapC.
  
     0.414
AGI23543.1
COG4317 Uncharacterized protein conserved in bacteria.
  
     0.410
AGI22549.1
COG3121 P pilus assembly protein, chaperone PapD.
  
    0.408
AGI25147.1
Hypothetical protein.
  
     0.408
AGI23121.1
COG0785 Cytochrome c biogenesis protein.
 
 
 0.407
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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