Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGI23260.1 | AGI24772.1 | H681_06920 | H681_14510 | Oxidoreductase; COG0656 Aldo/keto reductases, related to diketogulonate reductase. | Metabolite transport protein YaaU; COG0477 Permeases of the major facilitator superfamily. | 0.405 |
AGI23803.1 | AGI24772.1 | H681_09645 | H681_14510 | COG0477 Permeases of the major facilitator superfamily. | Metabolite transport protein YaaU; COG0477 Permeases of the major facilitator superfamily. | 0.494 |
AGI24771.1 | AGI24772.1 | H681_14505 | H681_14510 | NAD-dependent epimerase/dehydratase; COG0451 Nucleoside-diphosphate-sugar epimerases. | Metabolite transport protein YaaU; COG0477 Permeases of the major facilitator superfamily. | 0.420 |
AGI24772.1 | AGI23260.1 | H681_14510 | H681_06920 | Metabolite transport protein YaaU; COG0477 Permeases of the major facilitator superfamily. | Oxidoreductase; COG0656 Aldo/keto reductases, related to diketogulonate reductase. | 0.405 |
AGI24772.1 | AGI23803.1 | H681_14510 | H681_09645 | Metabolite transport protein YaaU; COG0477 Permeases of the major facilitator superfamily. | COG0477 Permeases of the major facilitator superfamily. | 0.494 |
AGI24772.1 | AGI24771.1 | H681_14510 | H681_14505 | Metabolite transport protein YaaU; COG0477 Permeases of the major facilitator superfamily. | NAD-dependent epimerase/dehydratase; COG0451 Nucleoside-diphosphate-sugar epimerases. | 0.420 |
AGI24772.1 | AGI24773.1 | H681_14510 | H681_14515 | Metabolite transport protein YaaU; COG0477 Permeases of the major facilitator superfamily. | COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins. | 0.410 |
AGI24772.1 | AGI24774.1 | H681_14510 | H681_14520 | Metabolite transport protein YaaU; COG0477 Permeases of the major facilitator superfamily. | AraC family transcriptional regulator. | 0.412 |
AGI24773.1 | AGI24772.1 | H681_14515 | H681_14510 | COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins. | Metabolite transport protein YaaU; COG0477 Permeases of the major facilitator superfamily. | 0.410 |
AGI24773.1 | AGI24774.1 | H681_14515 | H681_14520 | COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins. | AraC family transcriptional regulator. | 0.775 |
AGI24774.1 | AGI24772.1 | H681_14520 | H681_14510 | AraC family transcriptional regulator. | Metabolite transport protein YaaU; COG0477 Permeases of the major facilitator superfamily. | 0.412 |
AGI24774.1 | AGI24773.1 | H681_14520 | H681_14515 | AraC family transcriptional regulator. | COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins. | 0.775 |