Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGI22408.1 | AGI25023.1 | H681_02630 | H681_15775 | COG0464 ATPases of the AAA+ class. | COG2259 Predicted membrane protein. | 0.458 |
AGI23113.1 | AGI23114.1 | H681_06165 | H681_06170 | COG3220 Uncharacterized protein conserved in bacteria; Belongs to the UPF0276 family. | COG3219 Uncharacterized protein conserved in bacteria. | 0.990 |
AGI23113.1 | AGI25023.1 | H681_06165 | H681_15775 | COG3220 Uncharacterized protein conserved in bacteria; Belongs to the UPF0276 family. | COG2259 Predicted membrane protein. | 0.480 |
AGI23114.1 | AGI23113.1 | H681_06170 | H681_06165 | COG3219 Uncharacterized protein conserved in bacteria. | COG3220 Uncharacterized protein conserved in bacteria; Belongs to the UPF0276 family. | 0.990 |
AGI23114.1 | AGI25023.1 | H681_06170 | H681_15775 | COG3219 Uncharacterized protein conserved in bacteria. | COG2259 Predicted membrane protein. | 0.465 |
AGI25023.1 | AGI22408.1 | H681_15775 | H681_02630 | COG2259 Predicted membrane protein. | COG0464 ATPases of the AAA+ class. | 0.458 |
AGI25023.1 | AGI23113.1 | H681_15775 | H681_06165 | COG2259 Predicted membrane protein. | COG3220 Uncharacterized protein conserved in bacteria; Belongs to the UPF0276 family. | 0.480 |
AGI25023.1 | AGI23114.1 | H681_15775 | H681_06170 | COG2259 Predicted membrane protein. | COG3219 Uncharacterized protein conserved in bacteria. | 0.465 |
AGI25023.1 | AGI25024.1 | H681_15775 | H681_15780 | COG2259 Predicted membrane protein. | Slt family transglycosylase; Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella. In the N-terminal section; belongs to the bacterial solute- binding protein 3 family. | 0.565 |
AGI25024.1 | AGI25023.1 | H681_15780 | H681_15775 | Slt family transglycosylase; Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella. In the N-terminal section; belongs to the bacterial solute- binding protein 3 family. | COG2259 Predicted membrane protein. | 0.565 |