Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AGI23374.1 | AGI23397.1 | H681_07490 | H681_07605 | Hypothetical protein. | COG2825 Outer membrane protein. | 0.722 |
| AGI23374.1 | AGI24364.1 | H681_07490 | H681_12470 | Hypothetical protein. | Transcriptional regulator MvaV; COG4992 Ornithine/acetylornithine aminotransferase. | 0.717 |
| AGI23374.1 | AGI25112.1 | H681_07490 | H681_16220 | Hypothetical protein. | COG1309 Transcriptional regulator. | 0.459 |
| AGI23374.1 | AGI25922.1 | H681_07490 | H681_20275 | Hypothetical protein. | Transcriptional regulator MvaT, P16 subunit. | 0.733 |
| AGI23397.1 | AGI23374.1 | H681_07605 | H681_07490 | COG2825 Outer membrane protein. | Hypothetical protein. | 0.722 |
| AGI23397.1 | AGI24364.1 | H681_07605 | H681_12470 | COG2825 Outer membrane protein. | Transcriptional regulator MvaV; COG4992 Ornithine/acetylornithine aminotransferase. | 0.616 |
| AGI23397.1 | AGI25112.1 | H681_07605 | H681_16220 | COG2825 Outer membrane protein. | COG1309 Transcriptional regulator. | 0.417 |
| AGI23397.1 | AGI25922.1 | H681_07605 | H681_20275 | COG2825 Outer membrane protein. | Transcriptional regulator MvaT, P16 subunit. | 0.665 |
| AGI24364.1 | AGI23374.1 | H681_12470 | H681_07490 | Transcriptional regulator MvaV; COG4992 Ornithine/acetylornithine aminotransferase. | Hypothetical protein. | 0.717 |
| AGI24364.1 | AGI23397.1 | H681_12470 | H681_07605 | Transcriptional regulator MvaV; COG4992 Ornithine/acetylornithine aminotransferase. | COG2825 Outer membrane protein. | 0.616 |
| AGI24364.1 | AGI25112.1 | H681_12470 | H681_16220 | Transcriptional regulator MvaV; COG4992 Ornithine/acetylornithine aminotransferase. | COG1309 Transcriptional regulator. | 0.407 |
| AGI24903.1 | AGI25112.1 | H681_15175 | H681_16220 | COG3198 Uncharacterized protein conserved in bacteria. | COG1309 Transcriptional regulator. | 0.422 |
| AGI25109.1 | AGI25111.1 | H681_16205 | H681_16215 | 5'-methylthioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioinosine (MTI) to hypoxanthine and 5-methylthioribose-1-phosphate. Involved in the breakdown of S-methyl-5'-thioadenosine (MTA), a major by-product of polyamine biosynthesis. Catabolism of (MTA) occurs via deamination to MTI and phosphorolysis to hypoxanthine. | COG1376 Uncharacterized protein conserved in bacteria. | 0.821 |
| AGI25109.1 | AGI25112.1 | H681_16205 | H681_16220 | 5'-methylthioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioinosine (MTI) to hypoxanthine and 5-methylthioribose-1-phosphate. Involved in the breakdown of S-methyl-5'-thioadenosine (MTA), a major by-product of polyamine biosynthesis. Catabolism of (MTA) occurs via deamination to MTI and phosphorolysis to hypoxanthine. | COG1309 Transcriptional regulator. | 0.667 |
| AGI25109.1 | AGI25114.1 | H681_16205 | H681_16230 | 5'-methylthioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioinosine (MTI) to hypoxanthine and 5-methylthioribose-1-phosphate. Involved in the breakdown of S-methyl-5'-thioadenosine (MTA), a major by-product of polyamine biosynthesis. Catabolism of (MTA) occurs via deamination to MTI and phosphorolysis to hypoxanthine. | Cell division inhibitor; Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1:1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division. | 0.439 |
| AGI25109.1 | lexA | H681_16205 | H681_16225 | 5'-methylthioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioinosine (MTI) to hypoxanthine and 5-methylthioribose-1-phosphate. Involved in the breakdown of S-methyl-5'-thioadenosine (MTA), a major by-product of polyamine biosynthesis. Catabolism of (MTA) occurs via deamination to MTI and phosphorolysis to hypoxanthine. | LexA repressor; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. | 0.449 |
| AGI25109.1 | nagZ | H681_16205 | H681_16210 | 5'-methylthioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioinosine (MTI) to hypoxanthine and 5-methylthioribose-1-phosphate. Involved in the breakdown of S-methyl-5'-thioadenosine (MTA), a major by-product of polyamine biosynthesis. Catabolism of (MTA) occurs via deamination to MTI and phosphorolysis to hypoxanthine. | Beta-hexosaminidase; Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide- linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N- acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides. Belongs to the glycosyl hydrolase 3 family. NagZ subfamily. | 0.798 |
| AGI25111.1 | AGI25109.1 | H681_16215 | H681_16205 | COG1376 Uncharacterized protein conserved in bacteria. | 5'-methylthioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioinosine (MTI) to hypoxanthine and 5-methylthioribose-1-phosphate. Involved in the breakdown of S-methyl-5'-thioadenosine (MTA), a major by-product of polyamine biosynthesis. Catabolism of (MTA) occurs via deamination to MTI and phosphorolysis to hypoxanthine. | 0.821 |
| AGI25111.1 | AGI25112.1 | H681_16215 | H681_16220 | COG1376 Uncharacterized protein conserved in bacteria. | COG1309 Transcriptional regulator. | 0.677 |
| AGI25111.1 | AGI25114.1 | H681_16215 | H681_16230 | COG1376 Uncharacterized protein conserved in bacteria. | Cell division inhibitor; Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1:1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division. | 0.444 |
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