STRINGSTRING
AGI25115.1 AGI25115.1 AGI24977.1 AGI24977.1 AGI25911.1 AGI25911.1 AGI26667.1 AGI26667.1 AGI22020.1 AGI22020.1 AGI26405.1 AGI26405.1 AGI25838.1 AGI25838.1 AGI23870.1 AGI23870.1 AGI25791.1 AGI25791.1 AGI24958.1 AGI24958.1 AGI23217.1 AGI23217.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI25115.1Hypothetical protein. (78 aa)    
Predicted Functional Partners:
AGI24977.1
Hypothetical protein.
  
     0.767
AGI25911.1
Hypothetical protein.
  
     0.767
AGI26667.1
Hypothetical protein.
  
     0.765
AGI22020.1
Hypothetical protein.
  
     0.751
AGI26405.1
COG0640 Predicted transcriptional regulators.
  
     0.745
AGI25838.1
COG3141 Uncharacterized protein conserved in bacteria.
  
     0.743
AGI23870.1
Hypothetical protein.
  
     0.740
AGI25791.1
COG3141 Uncharacterized protein conserved in bacteria.
  
     0.739
AGI24958.1
COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor).
  
     0.711
AGI23217.1
Anti-sigma factor; COG3073 Negative regulator of sigma E activity.
  
     0.702
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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