STRINGSTRING
AGI25274.1 AGI25274.1 AGI22956.1 AGI22956.1 phhA phhA gcvP gcvP phhB phhB AGI25291.1 AGI25291.1 AGI25277.1 AGI25277.1 aroA aroA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AGI25274.1COG3283 Transcriptional regulator of aromatic amino acids metabolism. (520 aa)    
Predicted Functional Partners:
AGI22956.1
RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
  
   
 0.780
phhA
COG3186 Phenylalanine-4-hydroxylase.
     
 0.577
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
     
 0.545
phhB
COG2154 Pterin-4a-carbinolamine dehydratase.
     
 0.483
AGI25291.1
COG1605 Chorismate mutase.
      
 0.453
AGI25277.1
COG1448 Aspartate/tyrosine/aromatic aminotransferase.
     
 0.438
aroA
Bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.
      
 0.403
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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