Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGI21972.1 | AGI24313.1 | H681_00450 | H681_12215 | COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II. | AMP-dependent synthetase/ligase; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II. | 0.685 |
AGI21972.1 | AGI25382.1 | H681_00450 | H681_17570 | COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II. | Hypothetical protein; COG0477 Permeases of the major facilitator superfamily. | 0.786 |
AGI21972.1 | AGI25509.1 | H681_00450 | H681_18210 | COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II. | COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II. | 0.628 |
AGI21972.1 | AGI25511.1 | H681_00450 | H681_18220 | COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II. | COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II. | 0.624 |
AGI24196.1 | AGI25382.1 | H681_11630 | H681_17570 | AMP-binding domain protein; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II. | Hypothetical protein; COG0477 Permeases of the major facilitator superfamily. | 0.844 |
AGI24284.1 | AGI25382.1 | H681_12070 | H681_17570 | COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II. | Hypothetical protein; COG0477 Permeases of the major facilitator superfamily. | 0.491 |
AGI24313.1 | AGI21972.1 | H681_12215 | H681_00450 | AMP-dependent synthetase/ligase; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II. | COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II. | 0.685 |
AGI24313.1 | AGI25382.1 | H681_12215 | H681_17570 | AMP-dependent synthetase/ligase; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II. | Hypothetical protein; COG0477 Permeases of the major facilitator superfamily. | 0.488 |
AGI24313.1 | AGI25509.1 | H681_12215 | H681_18210 | AMP-dependent synthetase/ligase; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II. | COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II. | 0.693 |
AGI24313.1 | AGI25511.1 | H681_12215 | H681_18220 | AMP-dependent synthetase/ligase; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II. | COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II. | 0.682 |
AGI25382.1 | AGI21972.1 | H681_17570 | H681_00450 | Hypothetical protein; COG0477 Permeases of the major facilitator superfamily. | COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II. | 0.786 |
AGI25382.1 | AGI24196.1 | H681_17570 | H681_11630 | Hypothetical protein; COG0477 Permeases of the major facilitator superfamily. | AMP-binding domain protein; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II. | 0.844 |
AGI25382.1 | AGI24284.1 | H681_17570 | H681_12070 | Hypothetical protein; COG0477 Permeases of the major facilitator superfamily. | COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II. | 0.491 |
AGI25382.1 | AGI24313.1 | H681_17570 | H681_12215 | Hypothetical protein; COG0477 Permeases of the major facilitator superfamily. | AMP-dependent synthetase/ligase; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II. | 0.488 |
AGI25382.1 | AGI25383.1 | H681_17570 | H681_17575 | Hypothetical protein; COG0477 Permeases of the major facilitator superfamily. | COG4772 Outer membrane receptor for Fe3+-dicitrate. | 0.461 |
AGI25382.1 | AGI25509.1 | H681_17570 | H681_18210 | Hypothetical protein; COG0477 Permeases of the major facilitator superfamily. | COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II. | 0.901 |
AGI25382.1 | AGI25511.1 | H681_17570 | H681_18220 | Hypothetical protein; COG0477 Permeases of the major facilitator superfamily. | COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II. | 0.906 |
AGI25382.1 | AGI26456.1 | H681_17570 | H681_22945 | Hypothetical protein; COG0477 Permeases of the major facilitator superfamily. | Hypothetical protein. | 0.473 |
AGI25382.1 | AGI26457.1 | H681_17570 | H681_22950 | Hypothetical protein; COG0477 Permeases of the major facilitator superfamily. | COG5373 Predicted membrane protein. | 0.553 |
AGI25383.1 | AGI25382.1 | H681_17575 | H681_17570 | COG4772 Outer membrane receptor for Fe3+-dicitrate. | Hypothetical protein; COG0477 Permeases of the major facilitator superfamily. | 0.461 |
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