Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AGI22965.1 | AGI25416.1 | H681_05425 | H681_17745 | Toluene tolerance protein; COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component. | Hypothetical protein; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. | 0.520 |
| AGI22965.1 | AGI25996.1 | H681_05425 | H681_20645 | Toluene tolerance protein; COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component. | Hypothetical protein; COG0457 FOG: TPR repeat. | 0.477 |
| AGI22965.1 | lptD | H681_05425 | H681_02505 | Toluene tolerance protein; COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component. | Organic solvent tolerance protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. | 0.695 |
| AGI23710.1 | AGI25416.1 | H681_09180 | H681_17745 | COG4235 Cytochrome c biogenesis factor. | Hypothetical protein; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. | 0.482 |
| AGI23710.1 | AGI25996.1 | H681_09180 | H681_20645 | COG4235 Cytochrome c biogenesis factor. | Hypothetical protein; COG0457 FOG: TPR repeat. | 0.405 |
| AGI23710.1 | lptD | H681_09180 | H681_02505 | COG4235 Cytochrome c biogenesis factor. | Organic solvent tolerance protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. | 0.406 |
| AGI25414.1 | AGI25415.1 | H681_17735 | H681_17740 | Hypothetical protein; COG0628 Predicted permease. | COG0425 Predicted redox protein, regulator of disulfide bond formation; Belongs to the sulfur carrier protein TusA family. | 0.751 |
| AGI25414.1 | AGI25416.1 | H681_17735 | H681_17745 | Hypothetical protein; COG0628 Predicted permease. | Hypothetical protein; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. | 0.460 |
| AGI25415.1 | AGI25414.1 | H681_17740 | H681_17735 | COG0425 Predicted redox protein, regulator of disulfide bond formation; Belongs to the sulfur carrier protein TusA family. | Hypothetical protein; COG0628 Predicted permease. | 0.751 |
| AGI25415.1 | AGI25416.1 | H681_17740 | H681_17745 | COG0425 Predicted redox protein, regulator of disulfide bond formation; Belongs to the sulfur carrier protein TusA family. | Hypothetical protein; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. | 0.536 |
| AGI25416.1 | AGI22965.1 | H681_17745 | H681_05425 | Hypothetical protein; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. | Toluene tolerance protein; COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component. | 0.520 |
| AGI25416.1 | AGI23710.1 | H681_17745 | H681_09180 | Hypothetical protein; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. | COG4235 Cytochrome c biogenesis factor. | 0.482 |
| AGI25416.1 | AGI25414.1 | H681_17745 | H681_17735 | Hypothetical protein; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. | Hypothetical protein; COG0628 Predicted permease. | 0.460 |
| AGI25416.1 | AGI25415.1 | H681_17745 | H681_17740 | Hypothetical protein; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. | COG0425 Predicted redox protein, regulator of disulfide bond formation; Belongs to the sulfur carrier protein TusA family. | 0.536 |
| AGI25416.1 | AGI25417.1 | H681_17745 | H681_17750 | Hypothetical protein; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. | Transposase, IS4; COG3385 FOG: Transposase and inactivated derivatives. | 0.440 |
| AGI25416.1 | AGI25996.1 | H681_17745 | H681_20645 | Hypothetical protein; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. | Hypothetical protein; COG0457 FOG: TPR repeat. | 0.431 |
| AGI25416.1 | AGI26455.1 | H681_17745 | H681_22940 | Hypothetical protein; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. | Esterase EstA; COG3240 Phospholipase/lecithinase/hemolysin. | 0.433 |
| AGI25416.1 | AGI26472.1 | H681_17745 | H681_23025 | Hypothetical protein; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. | COG4942 Membrane-bound metallopeptidase. | 0.429 |
| AGI25416.1 | bamA | H681_17745 | H681_07600 | Hypothetical protein; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. | Outer membrane antigen; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.562 |
| AGI25416.1 | lptD | H681_17745 | H681_02505 | Hypothetical protein; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. | Organic solvent tolerance protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. | 0.519 |
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