Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGI22075.1 | AGI25424.1 | H681_00965 | H681_17785 | COG0811 Biopolymer transport proteins. | TonB family protein. | 0.601 |
AGI22075.1 | AGI25427.1 | H681_00965 | H681_17800 | COG0811 Biopolymer transport proteins. | Hypothetical protein; COG0824 Predicted thioesterase. | 0.511 |
AGI22075.1 | bamA | H681_00965 | H681_07600 | COG0811 Biopolymer transport proteins. | Outer membrane antigen; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.601 |
AGI22075.1 | cpoB | H681_00965 | H681_17770 | COG0811 Biopolymer transport proteins. | Tol-pal system protein YbgF; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family. | 0.420 |
AGI22075.1 | pal | H681_00965 | H681_17775 | COG0811 Biopolymer transport proteins. | Peptidoglycan-associated lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.691 |
AGI22075.1 | tolB | H681_00965 | H681_17780 | COG0811 Biopolymer transport proteins. | Translocation protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.794 |
AGI22075.1 | tolR | H681_00965 | H681_17790 | COG0811 Biopolymer transport proteins. | Biopolymer transport protein ExbD/TolR; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.932 |
AGI25424.1 | AGI22075.1 | H681_17785 | H681_00965 | TonB family protein. | COG0811 Biopolymer transport proteins. | 0.601 |
AGI25424.1 | AGI25427.1 | H681_17785 | H681_17800 | TonB family protein. | Hypothetical protein; COG0824 Predicted thioesterase. | 0.799 |
AGI25424.1 | cpoB | H681_17785 | H681_17770 | TonB family protein. | Tol-pal system protein YbgF; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family. | 0.727 |
AGI25424.1 | lptD | H681_17785 | H681_02505 | TonB family protein. | Organic solvent tolerance protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. | 0.545 |
AGI25424.1 | pal | H681_17785 | H681_17775 | TonB family protein. | Peptidoglycan-associated lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.749 |
AGI25424.1 | tolB | H681_17785 | H681_17780 | TonB family protein. | Translocation protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.953 |
AGI25424.1 | tolQ | H681_17785 | H681_17795 | TonB family protein. | TolQ protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.891 |
AGI25424.1 | tolR | H681_17785 | H681_17790 | TonB family protein. | Biopolymer transport protein ExbD/TolR; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.922 |
AGI25427.1 | AGI22075.1 | H681_17800 | H681_00965 | Hypothetical protein; COG0824 Predicted thioesterase. | COG0811 Biopolymer transport proteins. | 0.511 |
AGI25427.1 | AGI25424.1 | H681_17800 | H681_17785 | Hypothetical protein; COG0824 Predicted thioesterase. | TonB family protein. | 0.799 |
AGI25427.1 | cpoB | H681_17800 | H681_17770 | Hypothetical protein; COG0824 Predicted thioesterase. | Tol-pal system protein YbgF; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family. | 0.686 |
AGI25427.1 | pal | H681_17800 | H681_17775 | Hypothetical protein; COG0824 Predicted thioesterase. | Peptidoglycan-associated lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.677 |
AGI25427.1 | tolB | H681_17800 | H681_17780 | Hypothetical protein; COG0824 Predicted thioesterase. | Translocation protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.813 |
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