slyX protein (Pseudomonas sp. ATCC 13867) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Experiments

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[Homology]

Score

slyX

COG2900 Uncharacterized protein conserved in bacteria; Belongs to the SlyX family. (68 aa)

Predicted Functional Partners:

AGI25437.1

0.875

AGI25116.1

0.591

AGI23870.1

0.578

AGI23331.1

0.575

AGI26692.1

0.574

AGI23670.1

0.527

AGI22584.1

0.518

AGI25144.1

0.506

AGI23285.1

0.504

AGI26621.1

0.495

Your Current Organism:

Pseudomonas sp. ATCC 13867

NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AGI22584.1	AGI23331.1	H681_03510	H681_07275	Putative porin.	Hypothetical protein.	0.492
AGI22584.1	AGI23870.1	H681_03510	H681_09980	Putative porin.	Hypothetical protein.	0.720
AGI22584.1	AGI25116.1	H681_03510	H681_16240	Putative porin.	Hypothetical protein.	0.606
AGI22584.1	slyX	H681_03510	H681_17845	Putative porin.	COG2900 Uncharacterized protein conserved in bacteria; Belongs to the SlyX family.	0.518
AGI23285.1	AGI23331.1	H681_07045	H681_07275	Porin.	Hypothetical protein.	0.514
AGI23285.1	AGI23870.1	H681_07045	H681_09980	Porin.	Hypothetical protein.	0.700
AGI23285.1	AGI25116.1	H681_07045	H681_16240	Porin.	Hypothetical protein.	0.639
AGI23285.1	slyX	H681_07045	H681_17845	Porin.	COG2900 Uncharacterized protein conserved in bacteria; Belongs to the SlyX family.	0.504
AGI23331.1	AGI22584.1	H681_07275	H681_03510	Hypothetical protein.	Putative porin.	0.492
AGI23331.1	AGI23285.1	H681_07275	H681_07045	Hypothetical protein.	Porin.	0.514
AGI23331.1	AGI23870.1	H681_07275	H681_09980	Hypothetical protein.	Hypothetical protein.	0.550
AGI23331.1	AGI25116.1	H681_07275	H681_16240	Hypothetical protein.	Hypothetical protein.	0.760
AGI23331.1	AGI25144.1	H681_07275	H681_16380	Hypothetical protein.	Porin.	0.501
AGI23331.1	AGI26621.1	H681_07275	H681_23770	Hypothetical protein.	Anaerobically-induced outer membrane porin OprE precursor.	0.540
AGI23331.1	slyX	H681_07275	H681_17845	Hypothetical protein.	COG2900 Uncharacterized protein conserved in bacteria; Belongs to the SlyX family.	0.575
AGI23670.1	AGI23870.1	H681_08980	H681_09980	Putative porin.	Hypothetical protein.	0.696
AGI23670.1	AGI25116.1	H681_08980	H681_16240	Putative porin.	Hypothetical protein.	0.532
AGI23670.1	slyX	H681_08980	H681_17845	Putative porin.	COG2900 Uncharacterized protein conserved in bacteria; Belongs to the SlyX family.	0.527
AGI23870.1	AGI22584.1	H681_09980	H681_03510	Hypothetical protein.	Putative porin.	0.720
AGI23870.1	AGI23285.1	H681_09980	H681_07045	Hypothetical protein.	Porin.	0.700