STRINGSTRING
AGI25437.1 AGI25437.1 slyX slyX AGI26571.1 AGI26571.1 AGI25167.1 AGI25167.1 AGI25386.1 AGI25386.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI25437.1Hypothetical protein; COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases. (141 aa)    
Predicted Functional Partners:
slyX
COG2900 Uncharacterized protein conserved in bacteria; Belongs to the SlyX family.
  
    0.875
AGI26571.1
Nodulation efficiency protein D (NfeD) family protein; COG1585 Membrane protein implicated in regulation of membrane protease activity.
 
   
 0.437
AGI25167.1
COG2902 NAD-specific glutamate dehydrogenase.
  
    0.434
AGI25386.1
Putative two-component sensor; COG0591 Na+/proline symporter.
 
 
   0.431
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.