STRINGSTRING
AGI25444.1 AGI25444.1 AGI26311.1 AGI26311.1 AGI23971.1 AGI23971.1 AGI26884.1 AGI26884.1 AGI26074.1 AGI26074.1 AGI26881.1 AGI26881.1 AGI24537.1 AGI24537.1 AGI21994.1 AGI21994.1 AGI24868.1 AGI24868.1 AGI26007.1 AGI26007.1 AGI24616.1 AGI24616.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI25444.1Type IV pilus assembly PilZ. (469 aa)    
Predicted Functional Partners:
AGI26311.1
Hypothetical protein.
  
  
  0.952
AGI23971.1
Hypothetical protein.
  
     0.773
AGI26884.1
Putative hemagglutinin; COG3210 Large exoproteins involved in heme utilization or adhesion.
  
     0.765
AGI26074.1
Hypothetical protein.
  
     0.764
AGI26881.1
COG3210 Large exoproteins involved in heme utilization or adhesion.
  
     0.764
AGI24537.1
Putative helicase; COG0210 Superfamily I DNA and RNA helicases.
  
     0.752
AGI21994.1
Hypothetical protein; COG0438 Glycosyltransferase.
  
     0.748
AGI24868.1
COG3904 Predicted periplasmic protein.
  
     0.724
AGI26007.1
Zonular occludens toxin.
  
     0.714
AGI24616.1
Hypothetical protein.
  
     0.684
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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