STRINGSTRING
AGI25450.1 AGI25450.1 AGI25448.1 AGI25448.1 AGI25449.1 AGI25449.1 AGI24977.1 AGI24977.1 AGI23870.1 AGI23870.1 AGI23374.1 AGI23374.1 AGI25688.1 AGI25688.1 AGI25410.1 AGI25410.1 AGI23705.1 AGI23705.1 AGI26605.1 AGI26605.1 AGI25447.1 AGI25447.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI25450.1COG3308 Predicted membrane protein. (149 aa)    
Predicted Functional Partners:
AGI25448.1
COG1393 Arsenate reductase and related proteins, glutaredoxin family.
       0.800
AGI25449.1
Trp repressor binding protein WrbA; COG0655 Multimeric flavodoxin WrbA; Belongs to the WrbA family.
       0.800
AGI24977.1
Hypothetical protein.
  
     0.750
AGI23870.1
Hypothetical protein.
  
    0.723
AGI23374.1
Hypothetical protein.
  
     0.669
AGI25688.1
COG3529 Predicted nucleic-acid-binding protein containing a Zn-ribbon domain.
  
     0.667
AGI25410.1
Lipoprotein; COG3317 Uncharacterized lipoprotein.
  
     0.643
AGI23705.1
Heme exporter protein CcmD; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmD/CycX/HelD family.
  
     0.642
AGI26605.1
Hypothetical protein; COG0526 Thiol-disulfide isomerase and thioredoxins.
 
     0.612
AGI25447.1
Ribonuclease; COG1295 Predicted membrane protein.
  
    0.611
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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