STRINGSTRING
AGI25472.1 AGI25472.1 AGI25515.1 AGI25515.1 AGI25769.1 AGI25769.1 AGI24544.1 AGI24544.1 AGI23152.1 AGI23152.1 AGI22852.1 AGI22852.1 AGI25476.1 AGI25476.1 AGI25474.1 AGI25474.1 AGI25473.1 AGI25473.1 AGI25475.1 AGI25475.1 AGI25653.1 AGI25653.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI25472.1COG1289 Predicted membrane protein. (662 aa)    
Predicted Functional Partners:
AGI25515.1
Hypothetical protein; COG1566 Multidrug resistance efflux pump; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  
 0.792
AGI25769.1
Fusaric acid resistance protein; COG1566 Multidrug resistance efflux pump; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  
 0.792
AGI24544.1
COG1566 Multidrug resistance efflux pump.
 
  
 0.768
AGI23152.1
COG1566 Multidrug resistance efflux pump.
 
  
 0.767
AGI22852.1
COG3125 Heme/copper-type cytochrome/quinol oxidase, subunit 4.
  
     0.549
AGI25476.1
Putative lipoprotein; COG3218 ABC-type uncharacterized transport system, auxiliary component.
       0.513
AGI25474.1
ABC transporter ATP-binding protein; COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component.
       0.507
AGI25473.1
Putative ABC transporter permease; COG0767 ABC-type transport system involved in resistance to organic solvents, permease component.
       0.503
AGI25475.1
ABC transporter substrate-binding protein; COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component.
       0.500
AGI25653.1
Scaffold protein; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters.
   
    0.471
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.