STRINGSTRING
AGI25485.1 AGI25485.1 AGI25486.1 AGI25486.1 AGI23917.1 AGI23917.1 AGI25220.1 AGI25220.1 fabG-2 fabG-2 AGI22681.1 AGI22681.1 AGI25487.1 AGI25487.1 AGI25784.1 AGI25784.1 AGI26836.1 AGI26836.1 AGI24051.1 AGI24051.1 AGI24698.1 AGI24698.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI25485.1COG4122 Predicted O-methyltransferase. (220 aa)    
Predicted Functional Partners:
AGI25486.1
NLP/P60 protein; COG0791 Cell wall-associated hydrolases (invasion-associated proteins).
  
    0.813
AGI23917.1
Short chain dehydrogenase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
  
 
 0.796
AGI25220.1
Short chain dehydrogenase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
  
 
 0.695
fabG-2
3-ketoacyl-(acyl-carrier-protein) reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
 0.670
AGI22681.1
Short-chain dehydrogenase/reductase SDR; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
 
 
 0.664
AGI25487.1
Putative lipoprotein; COG0791 Cell wall-associated hydrolases (invasion-associated proteins).
  
    0.605
AGI25784.1
Putative dehydrogenase/reductase oxidoreductase protein; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
 0.572
AGI26836.1
Putative short-chain dehydrogenase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
  
 
 0.565
AGI24051.1
Short chain dehydrogenase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
  
 
 0.528
AGI24698.1
COG0826 Collagenase and related proteases.
  
  
 0.528
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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