STRINGSTRING
AGI25533.1 AGI25533.1 AGI25532.1 AGI25532.1 gshA gshA AGI24707.1 AGI24707.1 AGI25534.1 AGI25534.1 AGI21904.1 AGI21904.1 AGI26409.1 AGI26409.1 AGI22917.1 AGI22917.1 AGI22720.1 AGI22720.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI25533.1Hypothetical protein; COG5626 Uncharacterized conserved small protein. (105 aa)    
Predicted Functional Partners:
AGI25532.1
Hypothetical protein.
       0.609
gshA
Glutamate--cysteine ligase; COG2918 Gamma-glutamylcysteine synthetase; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily.
  
     0.492
AGI24707.1
COG0662 Mannose-6-phosphate isomerase.
  
     0.473
AGI25534.1
Leucine ABC transporter subunit substrate-binding protein LivK; COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component.
       0.466
AGI21904.1
Ser/Thr protein phosphatase family protein; COG1408 Predicted phosphohydrolases.
  
     0.452
AGI26409.1
Hypothetical protein; COG1409 Predicted phosphohydrolases.
  
     0.447
AGI22917.1
Glycine-glutamate dipeptide porin OpdP.
  
     0.438
AGI22720.1
Hypothetical protein.
  
     0.431
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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