STRINGSTRING
livM livM livG livG AGI25535.1 AGI25535.1 AGI25538.1 AGI25538.1 AGI26261.1 AGI26261.1 AGI25534.1 AGI25534.1 AGI26260.1 AGI26260.1 AGI26263.1 AGI26263.1 AGI26264.1 AGI26264.1 AGI26262.1 AGI26262.1 AGI26220.1 AGI26220.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
livMLeucine/isoleucine/valine transporter permease subunit; COG4177 ABC-type branched-chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. (418 aa)    
Predicted Functional Partners:
livG
Leucine/isoleucine/valine transporter ATP-binding subunit; COG0411 ABC-type branched-chain amino acid transport systems, ATPase component.
 
 0.999
AGI25535.1
COG0559 Branched-chain amino acid ABC-type transport system, permease components; Belongs to the binding-protein-dependent transport system permease family.
 
0.998
AGI25538.1
High-affinity amino acid ABC transporter ATP-binding protein; COG0410 ABC-type branched-chain amino acid transport systems, ATPase component; Belongs to the ABC transporter superfamily.
 
 0.998
AGI26261.1
ABC transporter ATP-binding protein; COG0411 ABC-type branched-chain amino acid transport systems, ATPase component.
 
 0.998
AGI25534.1
Leucine ABC transporter subunit substrate-binding protein LivK; COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component.
 
 
 0.996
AGI26260.1
ABC transporter ATP-binding protein; COG0410 ABC-type branched-chain amino acid transport systems, ATPase component; Belongs to the ABC transporter superfamily.
 
 0.996
AGI26263.1
COG0559 Branched-chain amino acid ABC-type transport system, permease components; Belongs to the binding-protein-dependent transport system permease family.
 
 0.996
AGI26264.1
Putative ABC transporter binding protein subunit; COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component.
 
 
 0.993
AGI26262.1
COG4177 ABC-type branched-chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
  
  
 
0.904
AGI26220.1
COG0410 ABC-type branched-chain amino acid transport systems, ATPase component.
  
 0.882
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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