STRINGSTRING
AGI25558.1 AGI25558.1 AGI26057.1 AGI26057.1 AGI24992.1 AGI24992.1 AGI26667.1 AGI26667.1 AGI25598.1 AGI25598.1 minE minE AGI25589.1 AGI25589.1 AGI22020.1 AGI22020.1 AGI25911.1 AGI25911.1 AGI25554.1 AGI25554.1 AGI22261.1 AGI22261.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI25558.1Transcriptional regulator; COG3226 Uncharacterized protein conserved in bacteria. (250 aa)    
Predicted Functional Partners:
AGI26057.1
Hypothetical protein.
  
     0.756
AGI24992.1
Hypothetical protein.
  
     0.748
AGI26667.1
Hypothetical protein.
  
     0.691
AGI25598.1
Hypothetical protein; COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB.
  
     0.684
minE
Cell division topological specificity factor MinE; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.
   
    0.681
AGI25589.1
COG4681 Uncharacterized protein conserved in bacteria.
   
    0.681
AGI22020.1
Hypothetical protein.
  
     0.664
AGI25911.1
Hypothetical protein.
  
     0.655
AGI25554.1
Lipoprotein; COG1073 Hydrolases of the alpha/beta superfamily.
 
     0.638
AGI22261.1
Putative CheW protein.
  
     0.610
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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