STRINGSTRING
AGI25561.1 AGI25561.1 AGI25564.1 AGI25564.1 AGI25563.1 AGI25563.1 AGI25567.1 AGI25567.1 AGI25566.1 AGI25566.1 AGI22722.1 AGI22722.1 AGI26862.1 AGI26862.1 AGI23453.1 AGI23453.1 AGI25151.1 AGI25151.1 AGI24581.1 AGI24581.1 AGI22723.1 AGI22723.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI25561.1COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain. (322 aa)    
Predicted Functional Partners:
AGI25564.1
COG0835 Chemotaxis signal transduction protein.
 
  
 0.988
AGI25563.1
COG0643 Chemotaxis protein histidine kinase and related kinases.
 
 0.987
AGI25567.1
Putative chemotaxis transducer; COG0840 Methyl-accepting chemotaxis protein.
 
 
 0.986
AGI25566.1
Hypothetical protein; COG0835 Chemotaxis signal transduction protein.
 
 
 0.983
AGI22722.1
Multi-sensor hybrid histidine kinase; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
 
 0.944
AGI26862.1
Two-component sensor; COG0642 Signal transduction histidine kinase.
 
 0.936
AGI23453.1
Sensor/response regulator hybrid; COG0642 Signal transduction histidine kinase.
 
 0.930
AGI25151.1
Putative two-component system sensor kinase; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
 
 0.927
AGI24581.1
Putative two-component system sensor kinase; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
 
 0.923
AGI22723.1
Cyclic di-GMP phosphodiesterase; COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain.
  
0.922
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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