STRINGSTRING
AGI25589.1 AGI25589.1 parC parC minE minE rmf rmf AGI25558.1 AGI25558.1 AGI26738.1 AGI26738.1 AGI25590.1 AGI25590.1 AGI23442.1 AGI23442.1 AGI25588.1 AGI25588.1 AGI26397.1 AGI26397.1 gltB gltB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI25589.1COG4681 Uncharacterized protein conserved in bacteria. (179 aa)    
Predicted Functional Partners:
parC
DNA topoisomerase IV subunit A; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 1 subfamily.
   
    0.787
minE
Cell division topological specificity factor MinE; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.
   
    0.765
rmf
Ribosome modulation factor; During stationary phase, converts 70S ribosomes to an inactive dimeric form (100S ribosomes); Belongs to the ribosome modulation factor family.
   
    0.681
AGI25558.1
Transcriptional regulator; COG3226 Uncharacterized protein conserved in bacteria.
   
    0.681
AGI26738.1
Phosphate uptake regulatory protein PhoU; Plays a role in the regulation of phosphate uptake.
   
    0.676
AGI25590.1
Diguanylate cyclase; COG2199 FOG: GGDEF domain.
       0.617
AGI23442.1
COG4807 Uncharacterized protein conserved in bacteria.
  
    0.564
AGI25588.1
single-stranded-DNA-specific exonuclease RecJ; COG0608 Single-stranded DNA-specific exonuclease.
     
 0.564
AGI26397.1
COG1451 Predicted metal-dependent hydrolase.
 
    0.495
gltB
COG0067 Glutamate synthase domain 1.
      
 0.487
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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