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AGI25627.1 AGI25627.1 AGI25628.1 AGI25628.1 AGI25629.1 AGI25629.1 AGI25630.1 AGI25630.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI25627.1COG0454 Histone acetyltransferase HPA2 and related acetyltransferases. (180 aa)    
Predicted Functional Partners:
AGI25628.1
COG2847 Uncharacterized protein conserved in bacteria.
       0.773
AGI25629.1
Hypothetical protein; COG3182 Uncharacterized iron-regulated membrane protein.
       0.492
AGI25630.1
TonB-dependent copper receptor; COG1629 Outer membrane receptor proteins, mostly Fe transport.
       0.400
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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