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AGI25629.1 AGI25629.1 AGI25630.1 AGI25630.1 AGI25628.1 AGI25628.1 AGI25631.1 AGI25631.1 AGI25627.1 AGI25627.1 AGI22321.1 AGI22321.1 AGI24398.1 AGI24398.1 AGI24483.1 AGI24483.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI25629.1Hypothetical protein; COG3182 Uncharacterized iron-regulated membrane protein. (456 aa)    
Predicted Functional Partners:
AGI25630.1
TonB-dependent copper receptor; COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
  
 0.774
AGI25628.1
COG2847 Uncharacterized protein conserved in bacteria.
  
    0.673
AGI25631.1
Hypothetical protein.
  
    0.518
AGI25627.1
COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.
       0.492
AGI22321.1
TonB-dependent siderophore receptor; COG1629 Outer membrane receptor proteins, mostly Fe transport.
 
  
 0.489
AGI24398.1
TonB-dependent siderophore receptor; COG1629 Outer membrane receptor proteins, mostly Fe transport.
 
  
 0.409
AGI24483.1
Cyclic peptide transporter; COG4615 ABC-type siderophore export system, fused ATPase and permease components.
 
  
 0.402
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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