STRINGSTRING
AGI25713.1 AGI25713.1 AGI25714.1 AGI25714.1 AGI25711.1 AGI25711.1 AGI25712.1 AGI25712.1 AGI25710.1 AGI25710.1 AGI25709.1 AGI25709.1 AGI25716.1 AGI25716.1 AGI26817.1 AGI26817.1 AGI26818.1 AGI26818.1 nosZ nosZ AGI26823.1 AGI26823.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AGI25713.1Cytochrome d1, heme region. (390 aa)    
Predicted Functional Partners:
AGI25714.1
Hypothetical protein; COG2010 Cytochrome c, mono- and diheme variants.
 
 
 0.992
AGI25711.1
COG1522 Transcriptional regulators.
 
  
 0.988
AGI25712.1
COG1522 Transcriptional regulators.
 
  
 0.987
AGI25710.1
Heme d1 biosynthesis protein NirH; COG1522 Transcriptional regulators.
 
  
 0.984
AGI25709.1
Heme d1 biosynthesis protein NirJ; COG0535 Predicted Fe-S oxidoreductases; Belongs to the precorrin methyltransferase family.
 
  
 0.964
AGI25716.1
COG2010 Cytochrome c, mono- and diheme variants.
 
 
0.952
AGI26817.1
COG3256 Nitric oxide reductase large subunit; Belongs to the heme-copper respiratory oxidase family.
 
 
 0.920
AGI26818.1
Nitric-oxide reductase subunit C; COG2010 Cytochrome c, mono- and diheme variants.
 
 
 0.889
nosZ
Nitrous-oxide reductase; Nitrous-oxide reductase is part of a bacterial respiratory system which is activated under anaerobic conditions in the presence of nitrate or nitrous oxide; In the C-terminal section; belongs to the cytochrome c oxidase subunit 2 family.
  
  
 0.874
AGI26823.1
Regulatory protein; COG3901 Regulator of nitric oxide reductase transcription.
 
  
 0.814
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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