Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGI23331.1 | AGI23609.1 | H681_07275 | H681_08675 | Hypothetical protein. | DNA binding-protein. | 0.757 |
AGI23331.1 | AGI25753.1 | H681_07275 | H681_19430 | Hypothetical protein. | Alginate biosynthesis protein; COG1215 Glycosyltransferases, probably involved in cell wall biogenesis. | 0.584 |
AGI23331.1 | AGI25755.1 | H681_07275 | H681_19440 | Hypothetical protein. | Alginate biosynthetic protein AlgK; COG0790 FOG: TPR repeat, SEL1 subfamily. | 0.751 |
AGI23331.1 | AGI25757.1 | H681_07275 | H681_19450 | Hypothetical protein. | Alginate-c5-mannuronan-epimerase AlgG. | 0.759 |
AGI23331.1 | AGI25758.1 | H681_07275 | H681_19455 | Hypothetical protein. | Alginate biosynthesis protein AlgX. | 0.758 |
AGI23331.1 | AGI25761.1 | H681_07275 | H681_19470 | Hypothetical protein. | Alginate o-acetyltransferase AlgJ. | 0.724 |
AGI23331.1 | algL | H681_07275 | H681_19460 | Hypothetical protein. | poly(beta-D-mannuronate) lyase; Catalyzes the depolymerization of alginate by cleaving the beta-1,4 glycosidic bond between two adjacent sugar residues via a beta-elimination mechanism; Belongs to the polysaccharide lyase 5 family. | 0.729 |
AGI23609.1 | AGI23331.1 | H681_08675 | H681_07275 | DNA binding-protein. | Hypothetical protein. | 0.757 |
AGI23609.1 | AGI25753.1 | H681_08675 | H681_19430 | DNA binding-protein. | Alginate biosynthesis protein; COG1215 Glycosyltransferases, probably involved in cell wall biogenesis. | 0.737 |
AGI23609.1 | AGI25755.1 | H681_08675 | H681_19440 | DNA binding-protein. | Alginate biosynthetic protein AlgK; COG0790 FOG: TPR repeat, SEL1 subfamily. | 0.773 |
AGI23609.1 | AGI25757.1 | H681_08675 | H681_19450 | DNA binding-protein. | Alginate-c5-mannuronan-epimerase AlgG. | 0.774 |
AGI23609.1 | AGI25758.1 | H681_08675 | H681_19455 | DNA binding-protein. | Alginate biosynthesis protein AlgX. | 0.772 |
AGI23609.1 | AGI25761.1 | H681_08675 | H681_19470 | DNA binding-protein. | Alginate o-acetyltransferase AlgJ. | 0.765 |
AGI23609.1 | algL | H681_08675 | H681_19460 | DNA binding-protein. | poly(beta-D-mannuronate) lyase; Catalyzes the depolymerization of alginate by cleaving the beta-1,4 glycosidic bond between two adjacent sugar residues via a beta-elimination mechanism; Belongs to the polysaccharide lyase 5 family. | 0.779 |
AGI25753.1 | AGI23331.1 | H681_19430 | H681_07275 | Alginate biosynthesis protein; COG1215 Glycosyltransferases, probably involved in cell wall biogenesis. | Hypothetical protein. | 0.584 |
AGI25753.1 | AGI23609.1 | H681_19430 | H681_08675 | Alginate biosynthesis protein; COG1215 Glycosyltransferases, probably involved in cell wall biogenesis. | DNA binding-protein. | 0.737 |
AGI25753.1 | AGI25755.1 | H681_19430 | H681_19440 | Alginate biosynthesis protein; COG1215 Glycosyltransferases, probably involved in cell wall biogenesis. | Alginate biosynthetic protein AlgK; COG0790 FOG: TPR repeat, SEL1 subfamily. | 0.972 |
AGI25753.1 | AGI25756.1 | H681_19430 | H681_19445 | Alginate biosynthesis protein; COG1215 Glycosyltransferases, probably involved in cell wall biogenesis. | Alginate production outer membrane protein AlgE. | 0.889 |
AGI25753.1 | AGI25757.1 | H681_19430 | H681_19450 | Alginate biosynthesis protein; COG1215 Glycosyltransferases, probably involved in cell wall biogenesis. | Alginate-c5-mannuronan-epimerase AlgG. | 0.995 |
AGI25753.1 | AGI25758.1 | H681_19430 | H681_19455 | Alginate biosynthesis protein; COG1215 Glycosyltransferases, probably involved in cell wall biogenesis. | Alginate biosynthesis protein AlgX. | 0.946 |
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