STRINGSTRING
AGI25786.1 AGI25786.1 AGI25788.1 AGI25788.1 AGI25787.1 AGI25787.1 AGI24427.1 AGI24427.1 AGI23824.1 AGI23824.1 AGI25785.1 AGI25785.1 AGI25789.1 AGI25789.1 AGI23822.1 AGI23822.1 AGI24425.1 AGI24425.1 AGI25784.1 AGI25784.1 AGI23823.1 AGI23823.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI25786.1Hypothetical protein; COG0842 ABC-type multidrug transport system, permease component. (377 aa)    
Predicted Functional Partners:
AGI25788.1
COG0845 Membrane-fusion protein.
 
    0.950
AGI25787.1
COG0842 ABC-type multidrug transport system, permease component.
 
   
0.860
AGI24427.1
ABC transporter ATP-binding protein/permease PltK; COG0842 ABC-type multidrug transport system, permease component.
 
    0.688
AGI23824.1
COG0842 ABC-type multidrug transport system, permease component.
 
    0.687
AGI25785.1
Lipoprotein.
       0.682
AGI25789.1
COG3223 Predicted membrane protein; Belongs to the PsiE family.
       0.556
AGI23822.1
COG0845 Membrane-fusion protein.
 
    0.550
AGI24425.1
COG0845 Membrane-fusion protein.
 
    0.504
AGI25784.1
Putative dehydrogenase/reductase oxidoreductase protein; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
   0.485
AGI23823.1
COG1131 ABC-type multidrug transport system, ATPase component.
 
   
 0.411
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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